Gene Synpcc7942_2115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2115 
Symbol 
ID3774334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2196274 
End bp2197128 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content56% 
IMG OID637800560 
Producthypothetical protein 
Protein accessionYP_401132 
Protein GI81300924 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.336635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.573893 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGG CTGGCTACAC CATTCGTCCC ATGACGCGAT CGGATTTGGA TCTAGCGATC 
GCTTGGGCTG CTGCTGAAGG CTGGAATCCG GGCTTGGATG ATGCCGACAG CTTCTATAGC
GCTGATCCCA CAGGGTTCTG GATGGGCTGG CTAGATGATC AACCGATCGC TTGTCTGTCG
ACGGTCAAAT ATGGCGATCG CTTTGGCTTT GTCGGCTTTT ACATCGTCGT ACCCCAATAC
CGAGGTCAAG GCTACGGCTG GGCGATTTGG CAGGCTGGGC TGGCGAGTTT GGGGGATCGC
CTGATCGGTT TGGACGGTGT GGTGGCACAA CAGGAGAACT ACCGGCGATC GCGCTTTGAA
TTGGCTTACT GTAACCAGCG CTATAGCGGC CTGAGTCGTA GGCTACAGTC CGAGCTCCCT
GCGGCCATTC GTCGCTTAGA ACCGGCGGAT TTTCCCTCGC TCTTGGCCTA CGATCGCCAG
CTCTTTCCTG AAGATCGCCA CTCGTTTCTG GAAAAATGGC TGACTCAACC TCGAGCAATC
GCCCTTGGCT ATTTCGCATC CCAAGGACTC CAGGGCTATG GACAGATTCG TCCAAGTCAG
GCGGGCTATC GGATCGGTCC CCTATTTGCC GATCAGCCTG AGATTGCTCA ACAACTCTTT
CTGGCTCTGC AGAGTCAAAT TCCCGAGAGT CAGCCCATCT TTTGGGATAT TCCCACGGTC
AATACGGCCG CGATCGCGTT CGCCACAGAG CAGGGGTTCA CCTCGATGTT CGACACCGCT
CGGATGTATC GCGGAGCAGC CCCCGATATT TCCCTCAATC GCCTCTATGG AGTGACGAGT
TTAGAGCTGG GCTAA
 
Protein sequence
MTLAGYTIRP MTRSDLDLAI AWAAAEGWNP GLDDADSFYS ADPTGFWMGW LDDQPIACLS 
TVKYGDRFGF VGFYIVVPQY RGQGYGWAIW QAGLASLGDR LIGLDGVVAQ QENYRRSRFE
LAYCNQRYSG LSRRLQSELP AAIRRLEPAD FPSLLAYDRQ LFPEDRHSFL EKWLTQPRAI
ALGYFASQGL QGYGQIRPSQ AGYRIGPLFA DQPEIAQQLF LALQSQIPES QPIFWDIPTV
NTAAIAFATE QGFTSMFDTA RMYRGAAPDI SLNRLYGVTS LELG