Gene Synpcc7942_2114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2114 
Symbol 
ID3774333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2194827 
End bp2195990 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content56% 
IMG OID637800559 
Productadaptive-response sensory kinase 
Protein accessionYP_401131 
Protein GI81300923 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.160696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.364338 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGAGT CTCTGTCACC ACAAGCACTG GCTCAACCGT TGCTACTGCA ACTGTTCGTC 
GATACCCGGC CCCTGTCACA GCACATTGTG CAGCGGGTTA AAAATATTTT GGCAGCAGTA
GAGGCAACCG TCCCCATCAG CTTGCAGGTG ATCAATGTGG CGGACCAGCC ACAACTGGTG
GAGTACTACC GCCTAGTCGT CACGCCTGCC CTGGTTAAAA TTGGTCCAGG CTCTCGCCAA
GTTCTGAGTG GCATCGACCT CACCGATCAA TTAGCCAACC AGTTGCCCCA GTGGCTGGTT
CAGCAAGAGG CCTTTTTTGC CGATCGAGAG CCACCTGAAG TCAACATTCC GTTCACGGAG
CTAGGCCAAC CCGAGACCCC CGCGTTGCAG CAGGCTGATG CCTTTTTTCA GCTTCAGCAA
CAATACGCTG ATCTCTCGGA GCGGACAAAA TTCCTTGAGC AGGTCATTGC TCTCGTCGCC
CACGACCTCC GCAATCCGCT AACCGCTGCT CTTTTGGCGG TCGACACCAT TCAAATCCGC
AGTCAATCCT TTTCTGTGGC GACAGCCAAG GAAATGCAGG GACTGTGCAG TCTGTTCGAT
CAGGCACGAT CGCAATTGCG TGAAATCGAG CGCATGATTG CCGAGATTTT GGAGGCAACT
CGCCACTCTG GCGAAAGCTT GCGGATCAAT CCCCGCGAAG TCGTCTTTGA GCCGCTCCTG
CAGCAGGTTC TGGAACAGTT GCATGAACGC TGGCGGAGTA AGCAGCAGCA GTTGATCACG
GATGTTCCAG GCGACCTGCC CACGCTCTAC GCCGACCCTG ACCGTCTGCG GCAGGTTCTG
GTCAATCTGC TAGACAACGC CATCAAATAC ACTCCGCCCG GGGGCACAAT CACGATCGCA
GCGCTCCATC GCACGAGCCA GAAAGTGCAG ATCAGCATCA GCGACACGGG CTCTGGCATC
CCTCGCGACC AGCTCAGCGT CATTTTCAAG AACTTGGTGC GGCTTTCCCG CGATAGCAGC
CAAGAGGGCT ACGGCATTGG ACTATCGGTT TGCCAGCGAA TTGTTCAGGC CCACTTTGGC
CGCATCTGGG TTGCTTCGGA ACTGGGCCAA GGCAGCACCT TCCACTTCAC GATGCCGGTT
TATCGCTACA CCATGCCCTG CTAA
 
Protein sequence
MGESLSPQAL AQPLLLQLFV DTRPLSQHIV QRVKNILAAV EATVPISLQV INVADQPQLV 
EYYRLVVTPA LVKIGPGSRQ VLSGIDLTDQ LANQLPQWLV QQEAFFADRE PPEVNIPFTE
LGQPETPALQ QADAFFQLQQ QYADLSERTK FLEQVIALVA HDLRNPLTAA LLAVDTIQIR
SQSFSVATAK EMQGLCSLFD QARSQLREIE RMIAEILEAT RHSGESLRIN PREVVFEPLL
QQVLEQLHER WRSKQQQLIT DVPGDLPTLY ADPDRLRQVL VNLLDNAIKY TPPGGTITIA
ALHRTSQKVQ ISISDTGSGI PRDQLSVIFK NLVRLSRDSS QEGYGIGLSV CQRIVQAHFG
RIWVASELGQ GSTFHFTMPV YRYTMPC