Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2114 |
Symbol | |
ID | 3774333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 2194827 |
End bp | 2195990 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637800559 |
Product | adaptive-response sensory kinase |
Protein accession | YP_401131 |
Protein GI | 81300923 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.160696 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.364338 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAGAGT CTCTGTCACC ACAAGCACTG GCTCAACCGT TGCTACTGCA ACTGTTCGTC GATACCCGGC CCCTGTCACA GCACATTGTG CAGCGGGTTA AAAATATTTT GGCAGCAGTA GAGGCAACCG TCCCCATCAG CTTGCAGGTG ATCAATGTGG CGGACCAGCC ACAACTGGTG GAGTACTACC GCCTAGTCGT CACGCCTGCC CTGGTTAAAA TTGGTCCAGG CTCTCGCCAA GTTCTGAGTG GCATCGACCT CACCGATCAA TTAGCCAACC AGTTGCCCCA GTGGCTGGTT CAGCAAGAGG CCTTTTTTGC CGATCGAGAG CCACCTGAAG TCAACATTCC GTTCACGGAG CTAGGCCAAC CCGAGACCCC CGCGTTGCAG CAGGCTGATG CCTTTTTTCA GCTTCAGCAA CAATACGCTG ATCTCTCGGA GCGGACAAAA TTCCTTGAGC AGGTCATTGC TCTCGTCGCC CACGACCTCC GCAATCCGCT AACCGCTGCT CTTTTGGCGG TCGACACCAT TCAAATCCGC AGTCAATCCT TTTCTGTGGC GACAGCCAAG GAAATGCAGG GACTGTGCAG TCTGTTCGAT CAGGCACGAT CGCAATTGCG TGAAATCGAG CGCATGATTG CCGAGATTTT GGAGGCAACT CGCCACTCTG GCGAAAGCTT GCGGATCAAT CCCCGCGAAG TCGTCTTTGA GCCGCTCCTG CAGCAGGTTC TGGAACAGTT GCATGAACGC TGGCGGAGTA AGCAGCAGCA GTTGATCACG GATGTTCCAG GCGACCTGCC CACGCTCTAC GCCGACCCTG ACCGTCTGCG GCAGGTTCTG GTCAATCTGC TAGACAACGC CATCAAATAC ACTCCGCCCG GGGGCACAAT CACGATCGCA GCGCTCCATC GCACGAGCCA GAAAGTGCAG ATCAGCATCA GCGACACGGG CTCTGGCATC CCTCGCGACC AGCTCAGCGT CATTTTCAAG AACTTGGTGC GGCTTTCCCG CGATAGCAGC CAAGAGGGCT ACGGCATTGG ACTATCGGTT TGCCAGCGAA TTGTTCAGGC CCACTTTGGC CGCATCTGGG TTGCTTCGGA ACTGGGCCAA GGCAGCACCT TCCACTTCAC GATGCCGGTT TATCGCTACA CCATGCCCTG CTAA
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Protein sequence | MGESLSPQAL AQPLLLQLFV DTRPLSQHIV QRVKNILAAV EATVPISLQV INVADQPQLV EYYRLVVTPA LVKIGPGSRQ VLSGIDLTDQ LANQLPQWLV QQEAFFADRE PPEVNIPFTE LGQPETPALQ QADAFFQLQQ QYADLSERTK FLEQVIALVA HDLRNPLTAA LLAVDTIQIR SQSFSVATAK EMQGLCSLFD QARSQLREIE RMIAEILEAT RHSGESLRIN PREVVFEPLL QQVLEQLHER WRSKQQQLIT DVPGDLPTLY ADPDRLRQVL VNLLDNAIKY TPPGGTITIA ALHRTSQKVQ ISISDTGSGI PRDQLSVIFK NLVRLSRDSS QEGYGIGLSV CQRIVQAHFG RIWVASELGQ GSTFHFTMPV YRYTMPC
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