| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1979 |
|---|
| Symbol | |
|---|
| ID | 3774166 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 2050014 |
|---|
| End bp | 2050736 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637800424 |
|---|
| Product | membrane protein-like |
|---|
| Protein accession | YP_400996 |
|---|
| Protein GI | 81300788 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4094] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.460955 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.262447 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCTGT CTTGGTGGAC ACCCAGCCAC ACGATCATGC TGGCGTTGCT GCTGCTGTTT
GCGATCGCCC ATAGTGGCTT GGCTGCATTG CGACCTTGGG GCGAAACCAA AATTGGGGCG
CGGGGCTATC GCATCCTGTT TGCACTAGTC AGCCTGCCCT TGGCCGTCGT GACGATTAGC
TACTTCATCC TCCATCGCTA TGATGGTGCG CTGCTCTGGC AGCTGCAGGG GATCCCGTGG
ATTGCCCCGC TCGTTTGGGT GCTGACGGCG ATCTCCTTTC TGCTGCTCTA TCCAGCGACC
TTTAACTTGC TGGAAATTGC TGCGATCGCC CAACCGCAAG TGCGCCTCTA TGAAACTGGG
ATTACTCGTA TTACCCGCCA TCCCCAAACC TTTGGCCAAA TTCTCTGGTG CCTCGCCCAC
AGTCTCTGGT TGGGCACCTC GTTCATGATG GTTGCCAGTG CCGGTTTGAT TGCGCATCAC
CTGTTCAGCA TCTGGCACGG CGATCGCCGC TTACAAAAAC GCTACGGCGA AGCCTTTGAG
GCGCTCAAGT CACGCACCTC GATCATCCCC TTCCTCGCGA TCGCTCAAGG GAAGCAAACC
CTCGTCTGGA AGGAGTTTCT GCGACCGGCT TACCTCGGCG TGGCGATTGC AATTGGACTC
TTCTGGTTCG CCCATCGCTG GATCCCACAG GCAACTGCTG CACTTGCTGA AATCGGCTGG
TAG
|
|---|
| Protein sequence | MPLSWWTPSH TIMLALLLLF AIAHSGLAAL RPWGETKIGA RGYRILFALV SLPLAVVTIS
YFILHRYDGA LLWQLQGIPW IAPLVWVLTA ISFLLLYPAT FNLLEIAAIA QPQVRLYETG
ITRITRHPQT FGQILWCLAH SLWLGTSFMM VASAGLIAHH LFSIWHGDRR LQKRYGEAFE
ALKSRTSIIP FLAIAQGKQT LVWKEFLRPA YLGVAIAIGL FWFAHRWIPQ ATAALAEIGW
|
|---|
| |