Gene Synpcc7942_1961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1961 
Symbol 
ID3774146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2032854 
End bp2033402 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content59% 
IMG OID637800404 
Productferripyochelin binding protein 
Protein accessionYP_400978 
Protein GI81300770 
COG category[R] General function prediction only 
COG ID[COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCAT TTGGCGATCG CACTTGGGGT GAACCGGACT GTCAGCGGGC GACCTATGTG 
GCAGAGAGCG CCGTGATCTG TGGCGATGTC GTTCTAGCCG AAGGCGTCAG CATTTGGCCC
ACGGCAGTTC TGCGGGGCGA TGTCGAGCGC ATTGAAATCG GCTGCAATAG CAATGTTCAA
GATGGAGCCG TACTGCATGG CGATCCGGGT CAGCCCACGA TTCTGGAAGA AGACGTCACC
GTTGGGCACC GGGCCGTGAT TCACTCCGCC AATATTGGGG CCGGTAGTTT GATTGGCATT
GGCGCGATCG TGCTCAATGG TGTCCAGATC GGCGCGGGAA GCATCGTCGG GGCGGGTGCC
GTCGTCACCA AGTCGATCCC CGCTGGTAGC CTAGCCATGG GGGTTCCTGC CAAGGTTGTG
CGATCGCTGA GTGCCGCTGA AATCGCCGAT CTCCGCCAAC ATGCCCAGCA TTATGTGGCC
TTAGCCGAAG CCCACGCCCA ACAACAAGCC GGCAAGACTA GCGAAAAAAG ATCGGAATCC
GCACAATAA
 
Protein sequence
MAAFGDRTWG EPDCQRATYV AESAVICGDV VLAEGVSIWP TAVLRGDVER IEIGCNSNVQ 
DGAVLHGDPG QPTILEEDVT VGHRAVIHSA NIGAGSLIGI GAIVLNGVQI GAGSIVGAGA
VVTKSIPAGS LAMGVPAKVV RSLSAAEIAD LRQHAQHYVA LAEAHAQQQA GKTSEKRSES
AQ