Gene Synpcc7942_1957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1957 
Symbol 
ID3774142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2029234 
End bp2029671 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content57% 
IMG OID637800400 
Productcyclic nucleotide-binding domain-containing protein 
Protein accessionYP_400974 
Protein GI81300766 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCTG AGTGCCACCC CCGATCGTTG CTGATTGGAG ATGCTGTCAT GCCTCGTATT 
CGCCCTGCCG AAATTGTGGA AGCTTGGCAG AAGCACGGTG AACCGCTGTT GGTGCCTGCG
GGTTCGGTGA TCTTCAATGC TGAAGAACAG GGCACCACGA TGTATGGCCT GCTGGAAGGC
GAAGTCGTAC TTAAGCGGGG CGATCAAGAG CTGGAGCGAA TCACTGCCGG TGATGTTTTT
GGTGAAGGCG CGATCGCGCA GGATCAACAT CAGCGTTTCT CGACTGCAGT GGCGGCAACG
GATTGCAAGC TAGCAACTCT GGACCGCGAA CGCTTTCTCT TCCTGATTCA CAACTCGCCT
GTTTTTGCCC TGGATGTAAT CGCCAGCCTC AGCACTCGGT TGCGGGCGAT CAAAGGTAGC
CTCGAGCCGA GCCAGTAG
 
Protein sequence
MLAECHPRSL LIGDAVMPRI RPAEIVEAWQ KHGEPLLVPA GSVIFNAEEQ GTTMYGLLEG 
EVVLKRGDQE LERITAGDVF GEGAIAQDQH QRFSTAVAAT DCKLATLDRE RFLFLIHNSP
VFALDVIASL STRLRAIKGS LEPSQ