Gene Synpcc7942_1952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1952 
Symbol 
ID3774137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2025399 
End bp2025740 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content50% 
IMG OID637800395 
Producthypothetical protein 
Protein accessionYP_400969 
Protein GI81300761 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCTT GGATCCAAGG GAATGTCCTC TATATCCATG AGGAAGATGC GCCAACCTAT 
CGCAAGACTG GTGGCATGGT GCGGAATTCC TATTTTTGGG CACTAAAGTC AATCGCTGCT
CGCGCCCGCC GCGATCGCCC TTGGGAATTT GAAGCTGAAA TTTGGCCCGC CCTCCAGCGA
ATGTTGCTTT CATTTTTAGA ATCTGGCTAT CTCTCGCTGA CAGAAGTGCA ATTGAGCTTT
AAGACCGACC AACCAATTCC TGAGAACCTG CGATCGGTTT CTACGTATCT CGAGGAGTCT
CAAGATGGCG AAGAGGCAGC AAGCGATCGT AAGTCACAAT AA
 
Protein sequence
MRAWIQGNVL YIHEEDAPTY RKTGGMVRNS YFWALKSIAA RARRDRPWEF EAEIWPALQR 
MLLSFLESGY LSLTEVQLSF KTDQPIPENL RSVSTYLEES QDGEEAASDR KSQ