Gene Synpcc7942_1908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1908 
Symbol 
ID3775271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1984647 
End bp1985081 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content55% 
IMG OID637800349 
Producthypothetical protein 
Protein accessionYP_400925 
Protein GI81300717 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.240356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.623306 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAG AACAAGTCGT CCCCACCCCC GAAGCAGCAG CCAAGCCTGC AGCTAAAAAA 
GAAAAGCCCC CTGCCCTCGA AGACAAACCT TTTAAAGAGT TTGTCCAGAC TGATCTGTTA
CCCGCAGTGC AGCAAGCCCT GAGCGATCGC GGCTTAGCCG ATCTCGACCT CCAATTTGTT
GAGGCTCCGC TGCCGGTCAC GGGCGATCGC TGTTGGCAGT TGCAGGGATC TTGGGCCAAG
GGCCAGCGGC GCTTCCTGCT GGGTTTTAGT GAAGAAAGCC TAACTGCACC CAAGGTGTTT
TCCTTAGCCG ACGGCAAGGC TACTCCAGCG ACCCTAGAAG CTTTCCTCGG CGATGAGCGC
AAAATTACCC TGCCCCTGCT GCTCAATCGC ATCCTCTCGC GTTTGAACGG TCAGAAATGG
CTCGAGCAAA ATTAA
 
Protein sequence
MSEEQVVPTP EAAAKPAAKK EKPPALEDKP FKEFVQTDLL PAVQQALSDR GLADLDLQFV 
EAPLPVTGDR CWQLQGSWAK GQRRFLLGFS EESLTAPKVF SLADGKATPA TLEAFLGDER
KITLPLLLNR ILSRLNGQKW LEQN