| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1835 |
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| Symbol | |
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| ID | 3774410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1903031 |
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| End bp | 1903657 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637800276 |
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| Product | hypothetical protein |
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| Protein accession | YP_400852 |
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| Protein GI | 81300644 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.210618 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCTC CTCTCGATCC CCAACCGCCC AAACGCACCG CGCTGGTGCA GTGGGGTGCA
GGCGTACAGT CCCTCGGAAT CCTGTTGGGA ACAATGTGGG CGATCGCCCT AGTCAACAGT
CTGCTGTTCA GCAATCGCTT GGTCTTCTAC GGCATTCGCC CGCGCAATCT CGGCGGACTT
TGGGGCATTT TGTTTGCGCC CTTCCTCCAC CTCAACTTGG CCCACCTGCT TGCGAACACC
GTACCGTTCC TGGTTTTAGG TGGGCTGATC ATCCTCCGCA GTCTGCGCGA CTTTTGGGTG
ACGTTGGGAA TCACGCTGCT GGTCAGTGGC TTGGGGGTTT GGCTCTTTGG ATCGGCGCGA
TCAGTTCATG TTGGGGCGAG TGGCCTAGTA TTTGGCTTCT TTGGCTTTCT GCTCAGCCGT
AGTTTGTTTG ACCGTAGTCT CCCGACGCTG ATTTTTGCGG TTGTTGCTTT CTTCCTCTAC
GGCAGCTTGA TTTGGGGCGT GCTGCCGCTG CAAGATGGCG TCTCCTGGGA AGGCCACCTT
TTTGGCTTTG TAGGAGGGGC GATCGCTGCA AAACTGTTGG CAACGCCCGC CGAGCCTGCC
GCGCGCGATG ATTGGAGCGA TTGGTAA
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| Protein sequence | MTAPLDPQPP KRTALVQWGA GVQSLGILLG TMWAIALVNS LLFSNRLVFY GIRPRNLGGL
WGILFAPFLH LNLAHLLANT VPFLVLGGLI ILRSLRDFWV TLGITLLVSG LGVWLFGSAR
SVHVGASGLV FGFFGFLLSR SLFDRSLPTL IFAVVAFFLY GSLIWGVLPL QDGVSWEGHL
FGFVGGAIAA KLLATPAEPA ARDDWSDW
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