Gene Synpcc7942_1821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1821 
Symbol 
ID3774396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1893904 
End bp1894263 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content53% 
IMG OID637800262 
Producthypothetical protein 
Protein accessionYP_400838 
Protein GI81300630 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.867185 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.536283 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCTA GCGATCGCAA AACCCGAATT GCCAAACTTT TGTTGGTTTA CATCAGCGGT 
TTTGCCTTTA TCGGCACCAG CGCAGTTGGC ATTTTTAGCG CCCTGCAATC GAGCTGGCAG
GCTAGTCAGG AGTCCGAGAC TGCAGGGTTG GTCAGCGCGG ACCTACTGAA ACAAATTCAG
GGCTACCGCA ATGTGGTCGC ACGCGAGCCC AACAACCGCT TTGCTCTCGA ACAATTGGTG
CAACTAGAGC TGCAGCTTGG CCGCAAAAAC ACAGCGCAAC AGTATCTCGA TCAGTTGCTG
AAGCTAGATC CCCAGAATCC GAGCTACCAA ACACTGCAGC AACAGCTCGC TCAAAAGTAG
 
Protein sequence
MAASDRKTRI AKLLLVYISG FAFIGTSAVG IFSALQSSWQ ASQESETAGL VSADLLKQIQ 
GYRNVVAREP NNRFALEQLV QLELQLGRKN TAQQYLDQLL KLDPQNPSYQ TLQQQLAQK