Gene Synpcc7942_1805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1805 
Symbol 
ID3774380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1874474 
End bp1875253 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content57% 
IMG OID637800246 
ProductHetI protein-like 
Protein accessionYP_400822 
Protein GI81300614 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2091] Phosphopantetheinyl transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.165373 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGCC CCAACCCTAG CGATGCGGTT CCAGTGCCGT CAATTCCTAG TTGCGATCGT 
GGCCCAATCC CCAACCCTGT GACTTGGCGT ACGAGTCCCG AACCACTCTT TTTATCAGCA
CAGACGGTGC ATCTCTGGCG TTGCTCCCTG ACGCGATCAC TCAGCTCTGC TGAACAGGCG
ATCGTGGCAG CCGATTGCGA TCGTGCCCAA GCCTACGGCT CTAACCGTCG TCACCAGTTC
CTGTGTGGAC GCTGGTGGTT GCGGCAGCTT CTCAGCCTCT ATCTCCCAGA AGAACCAGCA
GACTTTCGTT TCCAGCTCAG TCCAACGGGC AAGCCAGAAT TGCCACAATC CAATCTCTGC
TTCAACCTCA GTCACAGTGG CTCAACGCTG TTGATTGCGA TCGCTTGGCA ACCTGTGGGC
GTGGATGTGG AACAACCGCG ATCGCGATCT TGGTTAGCCT TGGCGCGTCG CTACTTCCCA
TCTGCCGAAC TGGCAGCAAT GCAACAGTCG ACTGACTGCG ATCGCTGGGG ACTGGCCAGT
TGGGTCTGTA AAGAAGCCTG GATCAAAGCC CAGGGACGAA CTTTGGCCAA TTCTCTCCGT
CATTTGCAGT GTGCCTGGAC TGCCAATGGG CAACCCCGGT TGTCTGGGCT AGGGAGCGAA
GAAAGTCAGG TGCAGCTGCT GCAAGTCGAT CCGCAGGAAC AGCTGTGGGC GGCGATCGCG
ATGCCTGCTG GGTGGAACTA CCAAACTTGG ACAGCCGCCA TAATCCGGAA AAATCATTAA
 
Protein sequence
MQRPNPSDAV PVPSIPSCDR GPIPNPVTWR TSPEPLFLSA QTVHLWRCSL TRSLSSAEQA 
IVAADCDRAQ AYGSNRRHQF LCGRWWLRQL LSLYLPEEPA DFRFQLSPTG KPELPQSNLC
FNLSHSGSTL LIAIAWQPVG VDVEQPRSRS WLALARRYFP SAELAAMQQS TDCDRWGLAS
WVCKEAWIKA QGRTLANSLR HLQCAWTANG QPRLSGLGSE ESQVQLLQVD PQEQLWAAIA
MPAGWNYQTW TAAIIRKNH