Gene Synpcc7942_1803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1803 
Symbol 
ID3774378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1873351 
End bp1873782 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content51% 
IMG OID637800244 
Productferric uptake regulator family protein 
Protein accessionYP_400820 
Protein GI81300612 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.149586 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGA CTGCGGCTCA AACCCCGATT CGCTCCCTTG AGGACGCTCT GAATCGTTGC 
CAAGACAAAG GCATGCGAGT CAGTCGTCAG CGCCGCTACA TCTTGGAATT ACTTTGGGAC
GTTCAAGAGC ATTTGTCGGC ACGAGAAATC TACGATCGCC TCAGTCGGGC AGGCCGTGAT
ATTGGTCATA CTTCCGTCTA CCAGAATTTA GAAGCCCTTG CCGCCAACGG CATTGTTGAA
TGTCTCGATC GCTCTGAGGG GAGATTGTAC GGCAATATCA GCGACTCGCA CAGCCACATC
AACTGTCTCG ATTCCAACCA GATTATTGAT GTTCAAGTGC AGCTCCCGGC TGAGTTGCTC
GAACGCTTAG AAGCTGAAAC TGGCGTTCGC ATTGTGGACT ATCGCATTGA TTTCTACGGT
TATCAGCGAT AG
 
Protein sequence
MSETAAQTPI RSLEDALNRC QDKGMRVSRQ RRYILELLWD VQEHLSAREI YDRLSRAGRD 
IGHTSVYQNL EALAANGIVE CLDRSEGRLY GNISDSHSHI NCLDSNQIID VQVQLPAELL
ERLEAETGVR IVDYRIDFYG YQR