Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1752 |
Symbol | |
ID | 3775452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1821018 |
End bp | 1821770 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637800191 |
Product | hypothetical protein |
Protein accession | YP_400769 |
Protein GI | 81300561 |
COG category | [C] Energy production and conversion |
COG ID | [COG1413] FOG: HEAT repeat |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.253022 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAGTG ATGATCTCTA CTTGATTGAG GACATGGAAA CGGCCTTAGC CGACCCCCTC GATCAGCTCC TCCAAGCGGA AGACACCACC CCGCCAGATC CTGAAGTGAT GCTGGCGCAG CTTCAGGATG CCAACGCCCT CAATCGTTTG GCAGCCGTTC GGGCTTTTGC GGCATTGACT GAGCCCAAGG CAATTCCTGC CCTGATCAAA GCGCTGGATG ATAGCTGCTC CAATATCCGA ACCGCCGCCG CCTATGCTTT GGGGCGCAAC GTCAGCCACC AAGCTGTTGA CGTTTTGATT GAGTGTCTGC GCCACGATCA GAACGACAAT GTGCGGAAGG CCATCGCTTG GGCACTGGGC AACTATAGCG ATCGCCGCTC GATTCAACCC CTGATTGAAG CCCTGCGCCG TGACATCGCC CCAGTTCGCC TCTGGGCAGC GAGTTCCTTG GGCAATACTG CCGTTGTCGA CTACGAGACT GTCATCGGTG CTGTTCCTAG TCTGATTGAA GCCCTGCGCC GCGATGCGGA AGCGGATGTT CGCAGCAACT GCGCTTGGGC ACTCGGTCAA CTCTGCCGAC CCCTACCGGC CAACATTGTC TATGCGACTG TCATTGACGC GTTGATTGAA GCGTTGGTCG AAGACGAGGA TCTGAGCGTG CGCGAAGATG CCAAAGCCTC GCTGTTGCAG GTAGGTGATG CTCGCGCTTT GCAAATGATT GAAACGCTGC AGCAGGATGG CTTGCTCTGG TAA
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Protein sequence | MRSDDLYLIE DMETALADPL DQLLQAEDTT PPDPEVMLAQ LQDANALNRL AAVRAFAALT EPKAIPALIK ALDDSCSNIR TAAAYALGRN VSHQAVDVLI ECLRHDQNDN VRKAIAWALG NYSDRRSIQP LIEALRRDIA PVRLWAASSL GNTAVVDYET VIGAVPSLIE ALRRDAEADV RSNCAWALGQ LCRPLPANIV YATVIDALIE ALVEDEDLSV REDAKASLLQ VGDARALQMI ETLQQDGLLW
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