Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1744 |
Symbol | |
ID | 3775444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1815423 |
End bp | 1815833 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637800183 |
Product | hypothetical protein |
Protein accession | YP_400761 |
Protein GI | 81300553 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0304185 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.745927 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAGACT ATCAGTTTCA ACGCGTGATT CGCTTTGGAG ATACGGATGC TGCAGGCGTG GTCTACTTTG CCCAACTGCT GTCGATTTGC CACGAAGCCT ACGAAGCCGC GATCGCAGCA CTAGGGATTG AGCTTCGTAG CTTCTTTAGC GATCGCGGAT CGGTCATCCT CCCAATTGTG CACGCCGAAA TCGACTACCA ACGTCCGACC TACTGTGGCG ATCGCCTAGA GATTGAGTTA CAGGCTACCG CTTTGGGTCG CGATCGCTTT CGGGTTGATT ATCGTCTCAG CCACAACCAT CAGCCAGTGG CCACAGCCCA AACCATTCAC CTTTGCCTAG AAAGCCAAAC AAGACAGCGA TCGCCCTTGC CCGAACGACT TCAGGACTGG TTGCAGATCA CTGCCGATTA A
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Protein sequence | MADYQFQRVI RFGDTDAAGV VYFAQLLSIC HEAYEAAIAA LGIELRSFFS DRGSVILPIV HAEIDYQRPT YCGDRLEIEL QATALGRDRF RVDYRLSHNH QPVATAQTIH LCLESQTRQR SPLPERLQDW LQITAD
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