Gene Synpcc7942_1744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1744 
Symbol 
ID3775444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1815423 
End bp1815833 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content54% 
IMG OID637800183 
Producthypothetical protein 
Protein accessionYP_400761 
Protein GI81300553 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0304185 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.745927 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGACT ATCAGTTTCA ACGCGTGATT CGCTTTGGAG ATACGGATGC TGCAGGCGTG 
GTCTACTTTG CCCAACTGCT GTCGATTTGC CACGAAGCCT ACGAAGCCGC GATCGCAGCA
CTAGGGATTG AGCTTCGTAG CTTCTTTAGC GATCGCGGAT CGGTCATCCT CCCAATTGTG
CACGCCGAAA TCGACTACCA ACGTCCGACC TACTGTGGCG ATCGCCTAGA GATTGAGTTA
CAGGCTACCG CTTTGGGTCG CGATCGCTTT CGGGTTGATT ATCGTCTCAG CCACAACCAT
CAGCCAGTGG CCACAGCCCA AACCATTCAC CTTTGCCTAG AAAGCCAAAC AAGACAGCGA
TCGCCCTTGC CCGAACGACT TCAGGACTGG TTGCAGATCA CTGCCGATTA A
 
Protein sequence
MADYQFQRVI RFGDTDAAGV VYFAQLLSIC HEAYEAAIAA LGIELRSFFS DRGSVILPIV 
HAEIDYQRPT YCGDRLEIEL QATALGRDRF RVDYRLSHNH QPVATAQTIH LCLESQTRQR
SPLPERLQDW LQITAD