| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1703 |
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| Symbol | |
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| ID | 3775402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 1768940 |
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| End bp | 1772017 |
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| Gene Length | 3078 bp |
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| Protein Length | 1025 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637800141 |
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| Product | putative alpha-mannosidase |
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| Protein accession | YP_400720 |
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| Protein GI | 81300512 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0383] Alpha-mannosidase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.114569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGGAGAC GACCCGATTC TATCCCGCTT GTGAAGGCTG ACACTGCTGC GATCGCTGCC
CTTGTGACGC TGCTGCGTCG GCAAACAGAA GTTGATTTAC AGCCTCATTG GCGGTTGGCT
CCGGCCACTG TTCAGGCGGA AGGCTGTCTA ATTGCCCAAG GATTCGAGAC TTGGTCGATC
GCGGAGCGCA ACGAAAAGCA GCACATTGCT TGGCCCCGCG GTCAGAAAAC GCTTTGGCTT
GCTTGCTGTT GGACGATTCC CGATCGCTGC GATCGCTGGC CTGTTGCTGA TATGGCCTTG
CGGCTGGCGC TGACTTGGTG GGCTGAAGCC GCTGAAGTCT ACGTTGATGG GCAGTTAGTC
CAGACTGGCG ACCTGTTTGA TTGCAGCAGT CGAGTGCTGT TGCGGGACAT GGCCCAGCCG
GGCGATCGCC TTCAGTTGTT GCTGCGTTTA GTCAGTCCTG GCCATGATGA CGGTGCTTTG
GTGCGATCGC AGCTGATTTT TGAGTCCTCA ACAGACTTGC CAGAGCTAAG TTTTCTGGGG
CAGGAGTTGG CGGTGGTCAA CAGTTTTGCC GAACAGCTCC AGCCGGAGTT GCTGCCGAAG
CTTGAAGCGA TCGCCCAGTC TTTTGCAGAC TTAGATTGCA GCCAAGCCGA TACGGCAGAT
CGATTGGCAC GACTGCGGGA TCAACTTGCT GCGATCGCAG CTCCGATTCG TCAGCGCCGT
GTCAGTCTGT TGGGTCATGC CCATTTAGAT CTGGCTTGGC TCTGGCCCGT TGCAGAAACT
TGGGAAGCCG CCCAGCGCAC CTTTGAATCA GTCCTGCAGT TGCAGGCGGC ATTCCCAGAG
CTGACCTTTG GTCACTCCAC ACCGGCGCTC TACGAGTGGA TTGAAAGGAA TCGCCCCGAT
TTATTTGTGG CGATTCAAGC TCAGATTGCG GCGGGACGTT GGGAAGTGAA TGCTGGCCCG
TGGGTGGAGC CAGAGCTGAA CCTAGTCAGT GCAGAATCGC TGGTGCGGCA ACTACTCTAT
GGGCAGCGCT ACAGCACCGA GACCTTAGGC GTCCAGAATC GCGTTGCTTG GCTGCCCGAT
AGTTTTGGTT TTTGCTGGCA GCTGCCGCAG CTGTTGCAAC AGGCGGGAAT CGATACCTTT
GTCACTCAAA AGCTGCGCTG GAACGACAGC ACCCAATTCC CACACGGCTT GTTTCGCTGG
CGATCGCCCG ATGGCAGTGA AGTGCTGGCG CTGATGTCGG CTCCAATTGG GACCGGAATC
GATCCCGAGG CGATCGCTAA CTACAGCTGG GAGTGGGAAC AGCAGACTGG TTCGCAAGAA
TCACTCTGGC TGCCGGGCGT GGGCGATCAT GGCGGTGGCC CCACCCGTGA CATGTTGGAA
CAAGCTCGCC GCTGGCAACA GTCGCCTTGC TTCCCTCAAC TGCAATTCGA GACGTTGACG
GCTTATCTAG AACGGTTGGG CGATCGCGAT CGCCTGCCAG TTTGGAACAA TGAACTCTAT
CTGGAATTTC ACCGAGGTTG CTACACCAGC CATGCCGATC AAAAAGCCTA CAACCGCCAA
GCGGAAACCG CTTTATACAG CGCTGAGGTT TGGGCTAGTT TTGCCAGCCT GCTGACGGGA
GCGGACTATC CCAAAGTCAA TTTAGAAGCA GCTTGGAAGG CAACGCTATT TAATCAGTTT
CACGACATTT TGCCCGGCTC TGCCATTCCC GAAGTCTATG CCGATGCCGA TCCGGAATGG
CAACAGGCGA TCGCGACGGC TCATCAGGTC AAATCCGAAG CCCTAACTGC AATCGCCGCT
CACATCGCTT GGACAGCACC ACCCAGCTCA ACTGCGCAGC CTTGGCTAAT CTTCAATGAC
TTGCCGGGCG ATCGCAGTAC GGTAATTGCG ATCGACGGTC ATTGGCGCAT CTTTGATTTA
TCAGGCCAGG AACTCCCCAG TCAGTTCACG CCAACAGAGA CGTTAGTCGC TGTCACAGTG
TCGGGCATGG GTTGGCTGGG ACTCTGGAGA GAAGCCGCGA TCGCAACGAT TCAAGCGATT
GATCCAACCG CTCCACTGCA CTTATCCAAT GATTGGCTTT CCGCCGAAAT TGATCCGGAA
ACAGGGGATC TCCTGCAACT ACGCGATCGC CAAGGCCGAG AGCTGTTGGA TGGCCAAGGC
AATCAATTCC AGCGATTCCA AGATCAAGGT CAGTATTGGG ATGCTTGGAA CATCGATCCG
GCTTACGAGC AACATCCGCT CCCATCACCA GAGTTGCAGT CTCTGACTTG GCTAGAACAA
GGACCGTTGC GCTGGCGACT CCGGCGTATT TTGAGCTGCG ATCGCTCGAC GATTACGCAG
GATTACGTAC TGACTGTTGC CGATCCTTGG CTGAAGCTGG AGACGACGAT CGATTGGCAG
CAGCGCCACG AATTACTCAA GGTCGCGTTT CCAACAACCG TCTCCGCTCC TGTGGCGACC
TATGAGATGG CAGCTGGGGC GATCGCGAGA CCCACACAGC CGCAAACGCC CGCCGAAGCG
GCTCAATGGG AAGTTCCGGC GTTGCGCTGG GCTGATCTGA GCGATCTGCA AGGCGGGCTA
GCGATTCTGA ACGACTGCAA GTATGGCTAT GACTGTCGCG ATCGCCAGTT GCGGCTAACC
CTACTGAGGG GGAGCACTTG GCCCGATCCC CAAGCCGATT TAGGGCAGCA TCAGTTTGCC
TACGCGATCT ATCCCCATCC AGACTCTTGG CAGGCCGCGG GTGTTGCTCC TCTGGCGCGT
CGCCTGAATC AACCGCTGAC AGGGCAGCCA GCGCCCTTCG CTCAAGGAGC CTTGCAACCT
AGCCAAACTC TTCTGAACTG GAATGCGGAT CAGCTCCTGC CGCTTGCTCT GAAACGATCA
GAAACGGGCG ATCGCTGGCT GTTGCGTTGC TACGAGGCGA TCGGTCAAAC CGCAGAGCTG
GTACTGACGG GCGATCGCAC TTGGCAGATC GGGGCTCGTT TAGATGGGCT GGAACAACCG
TTGTCCTCCT CTTCGACTGA GGTTCAACCT TGGCAAATTG CCAGCTTTGA GCTGCTGCAA
CCCACTCAAG AGAATTGA
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| Protein sequence | MRRRPDSIPL VKADTAAIAA LVTLLRRQTE VDLQPHWRLA PATVQAEGCL IAQGFETWSI
AERNEKQHIA WPRGQKTLWL ACCWTIPDRC DRWPVADMAL RLALTWWAEA AEVYVDGQLV
QTGDLFDCSS RVLLRDMAQP GDRLQLLLRL VSPGHDDGAL VRSQLIFESS TDLPELSFLG
QELAVVNSFA EQLQPELLPK LEAIAQSFAD LDCSQADTAD RLARLRDQLA AIAAPIRQRR
VSLLGHAHLD LAWLWPVAET WEAAQRTFES VLQLQAAFPE LTFGHSTPAL YEWIERNRPD
LFVAIQAQIA AGRWEVNAGP WVEPELNLVS AESLVRQLLY GQRYSTETLG VQNRVAWLPD
SFGFCWQLPQ LLQQAGIDTF VTQKLRWNDS TQFPHGLFRW RSPDGSEVLA LMSAPIGTGI
DPEAIANYSW EWEQQTGSQE SLWLPGVGDH GGGPTRDMLE QARRWQQSPC FPQLQFETLT
AYLERLGDRD RLPVWNNELY LEFHRGCYTS HADQKAYNRQ AETALYSAEV WASFASLLTG
ADYPKVNLEA AWKATLFNQF HDILPGSAIP EVYADADPEW QQAIATAHQV KSEALTAIAA
HIAWTAPPSS TAQPWLIFND LPGDRSTVIA IDGHWRIFDL SGQELPSQFT PTETLVAVTV
SGMGWLGLWR EAAIATIQAI DPTAPLHLSN DWLSAEIDPE TGDLLQLRDR QGRELLDGQG
NQFQRFQDQG QYWDAWNIDP AYEQHPLPSP ELQSLTWLEQ GPLRWRLRRI LSCDRSTITQ
DYVLTVADPW LKLETTIDWQ QRHELLKVAF PTTVSAPVAT YEMAAGAIAR PTQPQTPAEA
AQWEVPALRW ADLSDLQGGL AILNDCKYGY DCRDRQLRLT LLRGSTWPDP QADLGQHQFA
YAIYPHPDSW QAAGVAPLAR RLNQPLTGQP APFAQGALQP SQTLLNWNAD QLLPLALKRS
ETGDRWLLRC YEAIGQTAEL VLTGDRTWQI GARLDGLEQP LSSSSTEVQP WQIASFELLQ
PTQEN
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