Gene Synpcc7942_1683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1683 
Symbol 
ID3775382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1751063 
End bp1751308 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content54% 
IMG OID637800121 
Producthypothetical protein 
Protein accessionYP_400700 
Protein GI81300492 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0592602 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.304725 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACGC TCCGAATTCG ACTTCAAGTG CCAAAGAAAT ATCGCGATCA GCCGTTGATG 
GGAGATGTGC TGGCGAGCTG TCAACTGCAG TTCAATATCC TCGCGGCGCA TCTCGGTCCC
AATCGTGAGG AAGACGGCTG GTTTGACGTC ATGCTCACCG GGACTTCTGA AGACATTACT
GCGGCTCTGG CGGTCTTACG CGATCGCGAT ATTGAGCTCT GGTCCGACAC CGAAGACGAG
TTTTAA
 
Protein sequence
MATLRIRLQV PKKYRDQPLM GDVLASCQLQ FNILAAHLGP NREEDGWFDV MLTGTSEDIT 
AALAVLRDRD IELWSDTEDE F