Gene Synpcc7942_1675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1675 
Symbol 
ID3775747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1744281 
End bp1744766 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content56% 
IMG OID637800113 
Producthypothetical protein 
Protein accessionYP_400692 
Protein GI81300484 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.532109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGATC GCTACAACCT CGAAGATGTG CAGGAAATTC TGCAGCGAGC GATCGCGCGA 
TCGACAGCGC AAGATGAGTT CAGCGCTCAG CAGCTCCAGG AAATGGCAGC CGAATTGGGC
ATTTCCCCTG ATGAACTCCG GGCTGCCGAG ACAGATTGGC GCAGTTTGCA ACTGCAGAAT
CAAGAGCAGA CGGACTTTGA TCAGCTGCGC TGGCAGCGCT GGAATGATCA GGCTATCCGG
TTTTTGATTG TCAATGCTGG CCTGATTCTG CTCAACTGGG TCACCACCCA AGGGCTGGGT
TGGAGTCTCT ACATTTTGGT GCCTTGGACT ATTGGCCTCC TCCTGAGCTT CTGGCAAACC
TGGAAGCCAG CGCCCGAGGT CTACGAGAAG GAGTTCCAGT CCTGGCGACG GCAACGGCAA
TTACGCAAAT CCCTAGGGCG GTGGATCGAT CGCTGGCTCC TACCAACGCG ATCGCTGAAT
CGATAA
 
Protein sequence
MADRYNLEDV QEILQRAIAR STAQDEFSAQ QLQEMAAELG ISPDELRAAE TDWRSLQLQN 
QEQTDFDQLR WQRWNDQAIR FLIVNAGLIL LNWVTTQGLG WSLYILVPWT IGLLLSFWQT
WKPAPEVYEK EFQSWRRQRQ LRKSLGRWID RWLLPTRSLN R