Gene Synpcc7942_1673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1673 
Symbol 
ID3775745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1743189 
End bp1743854 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content59% 
IMG OID637800111 
Producthypothetical protein 
Protein accessionYP_400690 
Protein GI81300482 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCGG ATTCAGCGGT TTGGCTGCGG CGTCTCCCCC TGATTGCTGG TGCGATCGGG 
GGGACGTTGT TGATGGTCAA CCGGGCGCTT ACCCCCGAGC TACTGCCCAC TCAATCGCGA
TCAGATGCCC TCGGGATCTT GCTCAGCGCC CTGTTGATTT TGAGTGGATT GCTCTGGCAA
CGCGTTCAGC CCGTGCCACC TGAGATGGTC GTGCTGGAGG GAGAAGAGGG TTTTGAACTC
GATGACCAGT TGCCAGAAGC GAGCCGTCAG GAATTAGCTT GGGCGTCCAA GCTGCTATTG
ACCAATACGA TCACTGGCTC CCTGCTGATT TGGTACGACG GTCAGGTGCT GCTGCGGCGC
GGGATTTTAG CCCCGCCGGT GCCGGTTCAG CCCGGTCCGA TTGTCGAGCG CGTGCTGAAA
ACCGGTAAGG CCGTCTACTT GGTTGATCTC AAGCTCTATC CAGGCCGAAT TGAGTTCAAT
TACTTGCCCG CAAATAGTCA GGGCTTGATC TGTCAGCCGT TGGGCAATCG CGGTGTGTTG
CTGCTTGCTG CCCGCGCTCC CCGCAGCTAC ACCCAGCAGG ACGAGCGTTG GATTGCGGGC
ATTGCCGACA AACTGGATCA ATCACTGAGC CGGAGTGCCG CTGCGATCGC CGTAGAACAG
CCGTAG
 
Protein sequence
MASDSAVWLR RLPLIAGAIG GTLLMVNRAL TPELLPTQSR SDALGILLSA LLILSGLLWQ 
RVQPVPPEMV VLEGEEGFEL DDQLPEASRQ ELAWASKLLL TNTITGSLLI WYDGQVLLRR
GILAPPVPVQ PGPIVERVLK TGKAVYLVDL KLYPGRIEFN YLPANSQGLI CQPLGNRGVL
LLAARAPRSY TQQDERWIAG IADKLDQSLS RSAAAIAVEQ P