Gene Synpcc7942_1665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1665 
Symbol 
ID3775737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1733989 
End bp1735104 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content59% 
IMG OID637800103 
Productoxidoreductase 
Protein accessionYP_400682 
Protein GI81300474 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.351306 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCACT TTGATGCCAG TCAGCCGCTG CGAGTTGCGG TGCTGGGGAC GGGGTTTGGC 
TCAAAAGTTC ATATTCCCGC CCTACAGCAC CATTCCGAGA CGACGGTGCA AGCGGTCTAC
CATCGTCAGC CCGATCGCGC TGCGGCGATC GCGGTGCAAT TCGGCATTCC CAATGCCTAC
AGCGATCTCG ATCAGCTTCT TGCTGATCCC GCGATCGAAG CCGTTACGAT CGCCAGTCCG
CCCTTTCTGC ACTACCCCAT GGCTTGGGCG GCTCTCTCGG CGGGCAAATC GGTGCTGCTG
GAAAAACCGA CAACCCTCAA TGTTGAGGAA GCGCGGGCGC TGTGGAAGCT AGCGAGTAGT
CAGGGCTTAA CTGTCACCCT CGACTTTGAA TATCGCTTCG TCCCAGCTTG GCAGTACGTC
GCTGAGTTGC TGGCTGAAGG CGTGATCGGG CAGCCATGGC TAGTCAAACT CGATTGGTTG
ATGTCGAGTC GTGCCGATGC CAGTCGCCCT TGGAATTGGT ACGCCCTGCG ATCGCAGGGG
GGTGGCGCAC TGGGTGCCTT GGGTAGTCAT AGTTTTGACT ATTTGGCTTG GCTGTTTGGC
CCGGCCCGGC GACTGCAAGC TCGCTTGTTT ACCGCCATTC AAGAACGTCC TGATGCGACC
ACAGGTGAAC TGAAGCCCGT CGACTCCGAT GACACCGATC TGATTCAACT GGAATTGGCG
GAGGGTGTGC CCTGTCAGAT CAGCCTTAGC TCTGTCTGTC GTCAAGGGCG CGGGCACTGG
CTGGAGGTCT ATGGCGATCG CGGCACGCTG ATTCTCGGCA GCAGCAATCA AAAGGACTAC
GTCCACGGCT TTCAGGTCTG GTTCGCATCA GCAGGCCAAG CCCTTCAGGA GCTAACCGTT
CCTCAGCGCT TGGCATTCCG TCAGGAGTTT GCCGATGGTC GTTTGGCCCC CTTCCTGCGG
GTCGTCGATC ACTGGCTTGC CGATCTGCGC CACGGTCAGA TGACGGCGCC GAGTCTCAAG
GAAGGCCTGT ACTCGCAGTT GCTGATTGAT CTCTGCTGGC AGTCACAGCG CAGCGGTGAA
TGGCAAACCG TTCCTGAACT GAATCGCTTT CTCTAG
 
Protein sequence
MRHFDASQPL RVAVLGTGFG SKVHIPALQH HSETTVQAVY HRQPDRAAAI AVQFGIPNAY 
SDLDQLLADP AIEAVTIASP PFLHYPMAWA ALSAGKSVLL EKPTTLNVEE ARALWKLASS
QGLTVTLDFE YRFVPAWQYV AELLAEGVIG QPWLVKLDWL MSSRADASRP WNWYALRSQG
GGALGALGSH SFDYLAWLFG PARRLQARLF TAIQERPDAT TGELKPVDSD DTDLIQLELA
EGVPCQISLS SVCRQGRGHW LEVYGDRGTL ILGSSNQKDY VHGFQVWFAS AGQALQELTV
PQRLAFRQEF ADGRLAPFLR VVDHWLADLR HGQMTAPSLK EGLYSQLLID LCWQSQRSGE
WQTVPELNRF L