Gene Synpcc7942_1660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1660 
Symbol 
ID3775731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1730131 
End bp1730964 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content50% 
IMG OID637800097 
Productpotassium channel protein 
Protein accessionYP_400677 
Protein GI81300469 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.819465 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGTGT TGGATAACTG GCGATCGCAG CTCTACCAGA TGGTTATCGA AACGCGATCG 
CCTCAAGGTC GAGCTTTCAA CCTGTTGATT TACCTCTGCA CGATCGCCAG TGTCCTGACG
GTGGTTTTAG GTAGCGTTCA AAGCTGGCGG CAAGCGTACG GCGAGGTCTT CAATGGGCTG
GAGTGGGGCT TTACGATCAT TTTTAGTCTT GACTATTGCT TACGATTACT AGCTGCAACG
AAGGTGCGGC GCTACGCCCT CAGCTTCTTT GGCTTGGTTG ATTTAATCAC GATCTTGCCA
ACCTATTTTT CAGCTCTGCT GCCCGGCTTT AACTCACTCT TGATTCTGCG ATCGCTGCAG
CTTTTAAGAA TCTTTCGAGT CCTGAAACTT TTCCGGTTTG CAGAAGAGGC CAATCAACTT
TGGCGATCGC TCCGCAGCAG TGTACGACGG ATCACTGTTT TTCTCTGCGG TGTTTTTATT
CTGCAATTAA TTATTGCCAG CCTAATCTTT TCGATTGAGG GTAGTGATAA TGGCTTCGAC
AGCATCCCCA AAACGCTCTA TTGGACGATT GTCACAATGA CGACAGTTGG CTACGGCGAC
CTGACGCCTC AAACACCCTT GGGTCGGCTG CTTGCCTCCG GCATTATGTT GCTGGGCTAC
GGAATCATTG CAGTTCCCAG CGGCTTTGTT GCCTACGATC TGGCGCAACT AGAGACACAA
AAGCAACCAA GTTGTAGTCA ATGTGGCACG GCGATCGCTT GTCCTGATGC TCGTTTTTGC
CACCAGTGTG GTCAGGACCT ATCAGCCTCA ACACCTCCTC AGCCTGAAGC ATAG
 
Protein sequence
MVVLDNWRSQ LYQMVIETRS PQGRAFNLLI YLCTIASVLT VVLGSVQSWR QAYGEVFNGL 
EWGFTIIFSL DYCLRLLAAT KVRRYALSFF GLVDLITILP TYFSALLPGF NSLLILRSLQ
LLRIFRVLKL FRFAEEANQL WRSLRSSVRR ITVFLCGVFI LQLIIASLIF SIEGSDNGFD
SIPKTLYWTI VTMTTVGYGD LTPQTPLGRL LASGIMLLGY GIIAVPSGFV AYDLAQLETQ
KQPSCSQCGT AIACPDARFC HQCGQDLSAS TPPQPEA