Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1625 |
Symbol | |
ID | 3775694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1693698 |
End bp | 1694921 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637800061 |
Product | glycosyltransferase |
Protein accession | YP_400642 |
Protein GI | 81300434 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0764414 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.185019 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCATTT TGCTCATTCA CCAAAACTTT CCGGGGCAAT TCAAACATTT GGCACCGGCT TTGGTGGCCA ATGGCCATGA GGTCAGAACA TTGACTCTCC GGCAGGATCT ACCGGATCAG TGGCAGGGGG TGACTGTCCA TCGCTATCGG GCTCAGCGAA ACAGCAGTCC AACGGTTCAT CCCTGGGTTG GGGACTTTGA GACCAAGGTC ATTCGGGGAG AGGCTTGTTT TCGTGCTGCT CTCCAGCTGC GCAATCAGGG CTATCAACCG GATCTGATTT TGGCGCATCC AGGCTGGGGT GAAACGCTGT TTCTACAAGA TGTGTGGCCG GCTGCAAAGC TCGCAATCTA CTGCGAGTTT TACTACCGCA GTGCCGGGAG TGATGTCGAT TTCGATCCAG AATTCCAACG ACCGCAGGGT GAAGAAGATA CAGCCTGCCG CCTGCAGCTC AAAAACTTGA TTTACACCAT GCAGGGCGAT CGCGTTACGG CAGGCATTGC GCCAACGCAC TGGCAGGCCG ACCAGTTCCC AGAACCGCTG CGCTCCAAAA TTACAGTGGT GCACGATGGG ATTGATACTG AAGCGATCGC GCCTAATCCT AGCGCTACCA TTACCCTCAA TAATCAACTG AAGTTAGGGC GGAATGATGA AGTGATTACC TTCGTCAATC GCAACCTTGA GCCCTATCGC GGCTATCACA TTTTTATGCG ATCACTTCCT GAGATTTTGC AGCAACGTCC GAAGGCACGC GTCATCTTGG TTGGGGGTGA TGATGTCAGC TATGGCGCAC GGCCACCCGC AGGAACTTGG AAACAGATTT TCCTCAAAGA AGTCGCGGAT CGCCTTGACC TCAGCCGTGT CCATTTCGTT GGCAAAATTC CTTACAACGC TTTCCTGTCA CTCCTCCAGG TCTCCAGCGT TCATGTCTAT TTGACTTATC CATTCGTGCT GTCGTGGAGC TTGATCGAGG CGATGAGCTG TGGCTGTGCG ATCGTGGCCA GTGACACAGC ACCCGTTCGC GAGGTGATCA GTGACGGTGA GACGGGCCGA CTGGTTAATT TCTTTGATCC AGCGGGATTA GCAGCAACAG TGAGTGAGTT ACTAGCTAGC CCATCAGCGC GGGCCAAGCT CGGCAAAAAA GCGCGACTCT TTGCCCAGAA TCACTACGAT TTGCAACGAG TTTGTCTGCC GCAGCAGATG CAATGGGTGC GATCGCTTGC TTAA
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Protein sequence | MRILLIHQNF PGQFKHLAPA LVANGHEVRT LTLRQDLPDQ WQGVTVHRYR AQRNSSPTVH PWVGDFETKV IRGEACFRAA LQLRNQGYQP DLILAHPGWG ETLFLQDVWP AAKLAIYCEF YYRSAGSDVD FDPEFQRPQG EEDTACRLQL KNLIYTMQGD RVTAGIAPTH WQADQFPEPL RSKITVVHDG IDTEAIAPNP SATITLNNQL KLGRNDEVIT FVNRNLEPYR GYHIFMRSLP EILQQRPKAR VILVGGDDVS YGARPPAGTW KQIFLKEVAD RLDLSRVHFV GKIPYNAFLS LLQVSSVHVY LTYPFVLSWS LIEAMSCGCA IVASDTAPVR EVISDGETGR LVNFFDPAGL AATVSELLAS PSARAKLGKK ARLFAQNHYD LQRVCLPQQM QWVRSLA
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