Gene Synpcc7942_1611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1611 
Symbol 
ID3775678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1680389 
End bp1680682 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content55% 
IMG OID637800045 
Productnicotinamide nucleotide transhydrogenase alpha subunit-like 
Protein accessionYP_400628 
Protein GI81300420 
COG category[C] Energy production and conversion 
COG ID[COG3288] NAD/NADP transhydrogenase alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.162114 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.161892 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCA CCAATTGGTT CGCTGCACTC TTTGTCTTCA CCTTGGCGAG TTTTGCAGGC 
TTAGAAGTCA TTAATAAAGT GCCGCCAACG CTACATACCC CGCTGATGTC GGGGGCGAAT
GCGATTTCTG GCATTGTCCT GCTGGGTGCC CTGACACTCT TGGGTGGTGA GGGGCCACCG
CTCCTGAAAG GACTCGCGTT TACGGCTGCC ATTCTGGCCA CGGTGAATGT GGTGGGTGGC
TTTTGGGTAA CCGATCGCAT GTTGGCGATG TTCAAAGCAC GGGAGACGAA GTGA
 
Protein sequence
MSITNWFAAL FVFTLASFAG LEVINKVPPT LHTPLMSGAN AISGIVLLGA LTLLGGEGPP 
LLKGLAFTAA ILATVNVVGG FWVTDRMLAM FKARETK