| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1583 |
|---|
| Symbol | |
|---|
| ID | 3775007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 1648210 |
|---|
| End bp | 1648746 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637800016 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_400600 |
|---|
| Protein GI | 81300392 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3216] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGCTG AACAAGGAGC AACGGTTCCG GTGTTATTAT CCGCCCGCCA GCGTCGATAC
ACTTGGCCGC AACGTTGGCA ACGCCGCTGT CGCTATTGGT ATTACCGCGC GTTGCGCCTT
GAAACCTGCC CGAAAGCACT GGCACGGGGG ATTGGTCTGG GTGTGTTTGC CGGCTGCTTC
CCGCTATTTG GTCTGCAGAT TTTGATTGGG GTCAGCCTCG CTACGATTCT GAGAGGCAAC
AAGGTTCTAG CGGCGGCTGC AACCTGGATC AGCAATCCCT TCACCTATCT GCCGTTGTTC
AGCTTCAATT TCCAGTTGGG GCGGCTGTTT GTGCCCACCG ACAACCGCCT GCTGACTCTG
GAAAAGCTTA GCTCTTGGCA AACGCTGCAG GACTTAGGAA GCGACTTCCT CCATGCCTTG
ATGTTGGGTA GCCTTCTGGT GGCGATCGCC CTTGGCTTTG CTGCCTACTG GATTAGTTTG
CATTTGGCAC AACGACACCA TCAGCAGCGC CGTCACCGTC GTGCCGCCAA CGATTGA
|
|---|
| Protein sequence | MRAEQGATVP VLLSARQRRY TWPQRWQRRC RYWYYRALRL ETCPKALARG IGLGVFAGCF
PLFGLQILIG VSLATILRGN KVLAAAATWI SNPFTYLPLF SFNFQLGRLF VPTDNRLLTL
EKLSSWQTLQ DLGSDFLHAL MLGSLLVAIA LGFAAYWISL HLAQRHHQQR RHRRAAND
|
|---|
| |