| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1571 |
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| Symbol | |
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| ID | 3774995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1630063 |
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| End bp | 1630872 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637800004 |
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| Product | MIP family channel protein |
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| Protein accession | YP_400588 |
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| Protein GI | 81300380 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.20348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATGC TTAGAGCACT TAAACACCAC TGGCCAGAAT ACTTAATTGA AGCTTGGGGG
CTTGGGCTGT TTATGGTGGC AGCTGGGGTT GTCGGAACGC TTGTCTTCTA TCCCCAATCT
CCTGCCTATC AAGCGATCGC AGACCCTTTC CTACAGCGAG TCGTGATGGG CTTGGGGATG
GGTTTGACGG CAATGATCAT CATGTATTCA CCTTGGGGAA AGCGATCGGG GGCTCATATC
AACCCAGCCG TAACGCTCAC GTTCTACCGG CTTAAAAAAA TTGCTGCCTG GGATGCTTTT
TTCTACGTTG TTTTTCAGTT TATTGGTGGA CTTCTAGGAG TCGTGCTGGT TGCCTTTTTA
CTACAAACTC CCTTTACCCA AGCACCGGTC AACTATGTAG TCACGGTCCC TGGAAAACAG
GGGGCGATCG TTGCATGTAT CGCAGAGTAT TTCATTGCTG TACTCATGAT GAGTATGGTT
CTCTTCACCA GCAATCAGCC AAAGCTAGAG CGATTCACTC CATTTTTTGC GGGCTGTCTC
ATTGTCAGCT ACGTCATTTT TGAATCGCCG CTCTCAGGGT TTGGCATGAA CCCTGCTCGA
ACCGTTGCCT CAGCTTTACC CTCGGGTATT TGGACAGCTA TCTGGCTTTA TTTCCTTGCA
CCGATCGCAG GCATGTTAAC TGCAGCAGAA CTCTATCTGC GAATGATCGG GCCTCGCAAA
ATCTTCTGTG CCAAGCTCTA CCATGATCCT TTGTATCGCT GTATACACTG CGGCCATCTC
ATTCATTGGC ATCGTCCTCA TCTGAGATAG
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| Protein sequence | MKMLRALKHH WPEYLIEAWG LGLFMVAAGV VGTLVFYPQS PAYQAIADPF LQRVVMGLGM
GLTAMIIMYS PWGKRSGAHI NPAVTLTFYR LKKIAAWDAF FYVVFQFIGG LLGVVLVAFL
LQTPFTQAPV NYVVTVPGKQ GAIVACIAEY FIAVLMMSMV LFTSNQPKLE RFTPFFAGCL
IVSYVIFESP LSGFGMNPAR TVASALPSGI WTAIWLYFLA PIAGMLTAAE LYLRMIGPRK
IFCAKLYHDP LYRCIHCGHL IHWHRPHLR
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