Gene Synpcc7942_1553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1553 
Symbol 
ID3774977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1610364 
End bp1611257 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content60% 
IMG OID637799986 
Productphosphoesterase PHP-like 
Protein accessionYP_400570 
Protein GI81300362 
COG category[R] General function prediction only 
COG ID[COG0613] Predicted metal-dependent phosphoesterases (PHP family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.653581 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.211268 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGGC TCTCCTTGGT CTGTGCGATG AATAAGTCAC AAGCCTTACA TTCTACCAAT 
AGCCCTCCCC CCGAGTCATT CATGCTAGAG CTGCATACTC ACACCACCTA TTCCGACGGC
AGCTTGTCGC CGACCGAACT GGTCGAAGCG GCGATCGCAG CAGGGGTGAC AGCGCTCGCA
ATCACCGATC ACGACACCTT GGGAGGCTGG ACAGAAGCGA TCGCAGCCGC AGGCGATCGC
CTCGAAATTG TGCCGGGCAT TGAACTCAGC ACCCTCCACA ACGATCGCTC CTTACATCTA
CTCGGTTTCT GGCCCGATCG CGAAGTGTTG GAACCGTTAT TGCAGGAACA ACAGGCGGGG
CGTTGGCGAC GGGCTGAGGC GATCGCGACC AAACTCGCGG AATTGGGAGC CCCGATCGTC
TTACCGGAGT TGCAGGAAGG ACAAATGCCG GGGCGGCCTC ACTTTGCTCA AGCGCTCTTG
GATGCGGGGC ATGTCCAGAG CTGGGATGAA GCCTTCCGCC GCTTTCTCGG CGAACAAGCT
CCCGCCTATG TGCCCTACGA AAAACTGGAT GTGATCGAGG GAATTCGCTG GCTACGAGAT
GCGGGCGCTG TTGTCGTTTG GGCACACCCG TTTCTCTGGC GTGGCGGCCG CGTTGAAGAG
GCGTTGCCGC TACTCGTCGA AGCCGGTCTG CAAGGGCTCG AGGTAATTCA CCCCGGCCAT
AGTCCCAGCG ATCGCCGGCA ACTGGAGGAA TGGTGCGAGC GCTATGACCT GCTGCCTAGT
GGCGGCAGCG ACTATCACGG TCCCGGTAAT GGCGGCGGGC GTCATGCAGA GGCCCTGAAT
AAACAAGCGG TCCCAACCGG CTGGCTGGAA CCGCTGCGTA ATGCTGCTGA CTGA
 
Protein sequence
MQRLSLVCAM NKSQALHSTN SPPPESFMLE LHTHTTYSDG SLSPTELVEA AIAAGVTALA 
ITDHDTLGGW TEAIAAAGDR LEIVPGIELS TLHNDRSLHL LGFWPDREVL EPLLQEQQAG
RWRRAEAIAT KLAELGAPIV LPELQEGQMP GRPHFAQALL DAGHVQSWDE AFRRFLGEQA
PAYVPYEKLD VIEGIRWLRD AGAVVVWAHP FLWRGGRVEE ALPLLVEAGL QGLEVIHPGH
SPSDRRQLEE WCERYDLLPS GGSDYHGPGN GGGRHAEALN KQAVPTGWLE PLRNAAD