| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1546 |
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| Symbol | |
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| ID | 3774970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1601489 |
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| End bp | 1602886 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637799979 |
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| Product | putative ribonuclease II |
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| Protein accession | YP_400563 |
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| Protein GI | 81300355 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0108155 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACGG TTCTGACGAT TGATGGTCCA AGTAGCCTTG ACCTCGATGA TGGGGTCTGG
GCTGAACCAG TGGATGAACA GGGCGATCGC ATTTGCCTGA CAATCGCGAT CGCGGGGGTA
GCGACGGCTC TGCCACATCT GGGAATCGAA GAATGCGTGG CACTGGCACG GTTGCAGTCG
GTCTATCAAG GCACCCAGAT GGTACGGGCA ATGCTCTCGC CAGAACGGAC TGAAGCATTG
TCTTTGCTTC CAGGTGGGCC TCGTCCGGTG GTTTGTCTGC AAGCGTTGAT CTCTCGACGG
GGAGAGGTGC TGTTCTCGGA GTTCTGGGAA ACCGAAGTTG AATCTGTCGC CAAGCTCAGC
TATGAGCAGG TCAATGGCGT TCTGGCTGGT AAGGAAGATC ATGAACTGCG GGAAGTTCTG
CGTTGGCTAG CGATCGCGGC TGGACGGTTG GATAAGAACC GGCGCGGCCT CTGGGGGCGA
TCGCGACAGG GAGAGTTCAG AGATGATTTG GGGTCAGTAA TCACGGGCAA AGCGGAGCAG
TTGATTGCTT CGACGGCGAT CTTCTACAAC CAGATGGCAG GCGAGAAGCT CAAGCAATCA
GGCTTTCCGG CGCTGTTCCG GGTGCAAGAC CCAAGACAGG ATGAGGCGAT CGCGCCGTTG
TTTGAGGAGC ATGGTGGCAA TCCAACGGTG TTAGCTCCGT TGATTAGTCA CTGTTTGCCG
AGAGCACAGC ATCGCGTTAA AGCTGGGCTT CATTGGGCGT TGCAGTTGCC AGCCTATGCG
CGATCGTCCA GTCCGCTGCG GCGCTATGAA GATTTGGTCA ATCAACGGCA GTTGCTGGCA
ATTTTGAGGG AGAGTCCTTC CTTCTATCCG CCAGAGCTAT TGCTGGGGGT TTGCGATCGT
TTGCAGGACA AGGCGACGGC GGAGGTGGAG CGGCAGAAGC AAAAGTCAGA GGAGAAGTGG
CTGAGGGCAG CGTCTTCGGT CAAGCAACTA GAAACGGTGA CAGAAGGACA GTTTTCAGCG
GTGCTGCGAC AGGTCTCGGT GATTGGCTCG GTGCCGCCAG AGTTGGAGCA GCAGTTACGG
GAGCGCTTGG AAAAAGGAAG TCTGACGCCG AAGCATGCGG CGCAGATTCT CTCGGAGGGG
TTTCCTGCGG ATCTGAAGCA GGGGTTGATC GACAAGCTCA GTCAGGGGGA TCCGCTGCTC
AATGGCCTGA TGGTGCTCAA TACGCTGGGG CAACTGATTG GGACAGCTCC GCAGTTTGAC
TATGAGCCGG CGGAGGGGCA ATGGTGTTGT CGCTTGGTTT GGCAGGAGCA ACAGGTAGAG
GCGATCGCTT CCTCAAAAGT CAGAGCTAGG GAACTGGCGG CACTGATGGT TCTCAAAGGA
ATTAGCGTGG CAGAGTAA
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| Protein sequence | MQTVLTIDGP SSLDLDDGVW AEPVDEQGDR ICLTIAIAGV ATALPHLGIE ECVALARLQS
VYQGTQMVRA MLSPERTEAL SLLPGGPRPV VCLQALISRR GEVLFSEFWE TEVESVAKLS
YEQVNGVLAG KEDHELREVL RWLAIAAGRL DKNRRGLWGR SRQGEFRDDL GSVITGKAEQ
LIASTAIFYN QMAGEKLKQS GFPALFRVQD PRQDEAIAPL FEEHGGNPTV LAPLISHCLP
RAQHRVKAGL HWALQLPAYA RSSSPLRRYE DLVNQRQLLA ILRESPSFYP PELLLGVCDR
LQDKATAEVE RQKQKSEEKW LRAASSVKQL ETVTEGQFSA VLRQVSVIGS VPPELEQQLR
ERLEKGSLTP KHAAQILSEG FPADLKQGLI DKLSQGDPLL NGLMVLNTLG QLIGTAPQFD
YEPAEGQWCC RLVWQEQQVE AIASSKVRAR ELAALMVLKG ISVAE
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