| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1513 |
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| Symbol | |
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| ID | 3774937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1563532 |
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| End bp | 1564740 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637799946 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_400530 |
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| Protein GI | 81300322 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.318436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAGCAG TGACACTGCT CGGTTCAACC GGCTCGATCG GGACACAAAC CCTAGACATT
CTTGAGCAGT ATCCCGATCG CTTTCGCCTC GTAGGGCTGG CGGCTGGTCG TAATGTGGCG
CTGTTGTCGG AGCAAATTCG GCGGCACCGA CCAGAGATTG TGGCGATTCA AGATGCAGCT
CAGCTGTCGG AACTGCAAGC GGCGATCGCA GACCTTGATA ATCCGCCGCT CATCCTGACC
GGTGAGGCAG GTGTCACGGA AGTGGCTCGC TACGGTGATG CCGAGATTGT TGTCACTGGC
ATTGTCGGTT GCGCTGGTCT GCTACCCACG ATCGCCGCGA TCGAAGCCGG CAAGGATATC
GCCCTTGCCA ACAAAGAAAC CCTGATTGCA GCAGGCCCAG TGGTCCTGCC ACTCCTGCAA
AAGCACGGTG TCACCATTAC GCCTGCCGAC TCCGAGCACT CCGCGATCTT TCAGTGCATC
CAAGGGCTTT CAACCCATGC TGATTTTCGG CCTGCTCAAG TCGTGGCAGG GCTGCGACGG
ATTCTCCTGA CTGCCAGTGG CGGCGCTTTT CGGGACTGGC CGGTCGAACG GCTGTCGCAA
GTAACTGTCG CAGATGCGCT CAAGCATCCC AACTGGTCGA TGGGGCGCAA GATTACCGTC
GACTCCGCCA CCTTGATGAA TAAAGGCCTC GAGGTGATCG AAGCCCACTA TCTCTTCGGC
TTGGATTACG ACTACATCGA CATCGTCATC CATCCCCAGA GCATCATCCA CTCGCTGATT
GAGCTAGAAG ATACCTCCGT CTTGGCGCAA TTGGGCTGGC CGGATATGCG ACTGCCCTTG
CTCTACGCCC TCTCCTGGCC CGATCGCCTC TCTACTCAAT GGTCGGCGCT CGATCTGGTC
AAAGCGGGCA GCTTGGAGTT CCGGGAACCG GATCACGCCA AATACCCCTG CATGGACTTG
GCCTACGCCG CCGGTCGCAA AGGCGGCACA ATGCCAGCCG TCTTGAATGC GGCGAATGAG
CAAGCCGTCG CCCTCTTCCT AGAGGAGCAA ATTCACTTCT CGGATATTCC GCGCCTGATT
GAACGTGCCT GCGATCGCCA CCAAACGGAG TGGCAACAGC AACCGAGCTT GGATGACATT
TTGGCCTACG ACGCTTGGGC ACGGCAGTTT GTGCAAGCTA GCTATCAAAG TCTGGAATCC
GTCGTTTAG
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| Protein sequence | MKAVTLLGST GSIGTQTLDI LEQYPDRFRL VGLAAGRNVA LLSEQIRRHR PEIVAIQDAA
QLSELQAAIA DLDNPPLILT GEAGVTEVAR YGDAEIVVTG IVGCAGLLPT IAAIEAGKDI
ALANKETLIA AGPVVLPLLQ KHGVTITPAD SEHSAIFQCI QGLSTHADFR PAQVVAGLRR
ILLTASGGAF RDWPVERLSQ VTVADALKHP NWSMGRKITV DSATLMNKGL EVIEAHYLFG
LDYDYIDIVI HPQSIIHSLI ELEDTSVLAQ LGWPDMRLPL LYALSWPDRL STQWSALDLV
KAGSLEFREP DHAKYPCMDL AYAAGRKGGT MPAVLNAANE QAVALFLEEQ IHFSDIPRLI
ERACDRHQTE WQQQPSLDDI LAYDAWARQF VQASYQSLES VV
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