Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1462 |
Symbol | |
ID | 3773634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1514071 |
End bp | 1515141 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637799894 |
Product | imelysin |
Protein accession | YP_400479 |
Protein GI | 81300271 |
COG category | [R] General function prediction only |
COG ID | [COG3489] Predicted periplasmic lipoprotein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0336824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0166245 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATCGTGA CAGGCTCTCA GGTCAGGCAA GGTTTAAACA CTTGGTTTGT GCTCCCGCTG CGTAGGACTG CGATCGGCCT GGGCTGCGCC GGAGTTGCAA CGCTCTTCTC TGCCTGTGGT CAAACCCAGG CATTGATTAC CAATCAGACC ATTCAAGGAT TTGTCGATCA GGTTGTCGTT CCTAGCTATG TCAGCGTTGC TGCTGGCGCA ACTCAGCTGG AACAAGCCCT CCAAACCTAT CAGCAGGCAC CGACTGCTGC CAATTTGGAG GCGGCTCGAC AAGCCTGGCG GGTCGCCCGC GATCGCTGGG AGCAGACTGA ATGTTTTGCT TTTGGGCCAG CGGATAGCGA AGGGTTTGAT GGGGCAATGG ACACCTGGCC TATCGATCGC CAAGGCTTGA AAACTGCCGC AGCTCAGCCA GTGGAGCAAC GGGAAGATAG CCGTAAGGGC TTCCACGCGA TCGAGGAGTT GTTGTTTGCC GCAACGGAAC CGACGCTGAG CGATCGCCAG CATCTTGTGA TCTTGGCGAC GGACCTTACC AAGCAAGCAC AGGGGTTGGT CACCCGTTGG CAACAAGCGA GTGATCAGCC TGCCTATCGC TCAGTTTTGC TCAGCGCTGG CTCGACAGAT TCGGCCTATC CCACCCTGAA TGCTGCGGGA ACCGAGATTG TTCAAGGCCT GGTTGATAGC CTCTCAGAGG TCGCCAGCGA AAAGATCGGC GGGCCACTCG AGACTCAAGA ACCCGATCGC TTTGAAAGTT TTGTTAGCCG CAATACTCTG TCTGACCTGC GCAACAACTG GACTGGCGCT TGGAATGTCT ATCGCGGTCA GCGGTCTGAT GGGGTCGCGG CAGGAAGTCT GCAACAGCGT TTACAGCAAC AACATCCAGT GATCGCTCAG CAACTCGATC AGCAATTTGC AACTGCCCGC CAAGCCCTTT GGGCTATTCC TGAACCGATT GAAACCAACC TTGCCAGCCC AAGAGGCAAA GTGGCTGTCC TCACGGCTCA AACTGCGATC GCAGCAGTCA GCGACACCCT AGAGCGTCAA GTTCTCCCGC TGGTTCAGTA G
|
Protein sequence | MIVTGSQVRQ GLNTWFVLPL RRTAIGLGCA GVATLFSACG QTQALITNQT IQGFVDQVVV PSYVSVAAGA TQLEQALQTY QQAPTAANLE AARQAWRVAR DRWEQTECFA FGPADSEGFD GAMDTWPIDR QGLKTAAAQP VEQREDSRKG FHAIEELLFA ATEPTLSDRQ HLVILATDLT KQAQGLVTRW QQASDQPAYR SVLLSAGSTD SAYPTLNAAG TEIVQGLVDS LSEVASEKIG GPLETQEPDR FESFVSRNTL SDLRNNWTGA WNVYRGQRSD GVAAGSLQQR LQQQHPVIAQ QLDQQFATAR QALWAIPEPI ETNLASPRGK VAVLTAQTAI AAVSDTLERQ VLPLVQ
|
| |