Gene Synpcc7942_1426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1426 
SymbolrbcL 
ID3773598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1479461 
End bp1480879 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content58% 
IMG OID637799858 
Productribulose bisophosphate carboxylase 
Protein accessionYP_400443 
Protein GI81300235 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAGA CGCAATCTGC CGCAGGCTAT AAGGCCGGGG TGAAGGACTA CAAACTCACC 
TATTACACCC CCGATTACAC CCCCAAAGAC ACTGACCTGC TGGCGGCTTT CCGCTTCAGC
CCTCAGCCGG GTGTCCCTGC TGACGAAGCT GGTGCGGCGA TCGCGGCTGA ATCTTCGACC
GGTACCTGGA CCACCGTGTG GACCGACTTG CTGACCGACA TGGATCGGTA CAAAGGCAAG
TGCTACCACA TCGAGCCGGT GCAAGGCGAA GAGAACTCCT ACTTTGCGTT CATCGCTTAC
CCGCTCGACC TGTTTGAAGA AGGGTCGGTC ACCAACATCC TGACCTCGAT CGTCGGTAAC
GTGTTTGGCT TCAAAGCTAT CCGTTCGCTG CGTCTGGAAG ACATCCGCTT CCCCGTCGCC
TTGGTCAAAA CCTTCCAAGG TCCTCCCCAC GGTATCCAAG TCGAGCGCGA CCTGCTGAAC
AAGTACGGCC GTCCGATGCT GGGTTGCACG ATCAAACCAA AACTCGGTCT GTCGGCGAAA
AACTACGGTC GTGCCGTCTA CGAATGTCTG CGCGGCGGTC TGGACTTCAC CAAAGACGAC
GAAAACATCA ACTCGCAGCC GTTCCAACGC TGGCGCGATC GCTTCCTGTT TGTGGCTGAT
GCAATCCACA AATCGCAAGC AGAAACCGGT GAAATCAAAG GTCACTACCT GAACGTGACC
GCGCCGACCT GCGAAGAAAT GATGAAACGG GCTGAGTTCG CTAAAGAACT CGGCATGCCG
ATCATCATGC ATGACTTCTT GACGGCTGGT TTCACCGCCA ACACCACCTT GGCAAAATGG
TGCCGCGACA ACGGCGTCCT GCTGCACATC CACCGTGCAA TGCACGCGGT GATCGACCGT
CAGCGTAACC ACGGGATTCA CTTCCGTGTC TTGGCCAAGT GTTTGCGTCT GTCCGGTGGT
GACCACCTCC ACTCCGGCAC CGTCGTCGGC AAACTGGAAG GCGACAAAGC TTCGACCTTG
GGCTTTGTTG ACTTGATGCG CGAAGACCAC ATCGAAGCTG ACCGCAGCCG TGGGGTCTTC
TTCACCCAAG ATTGGGCGTC GATGCCGGGC GTGCTGCCGG TTGCTTCCGG TGGTATCCAC
GTGTGGCACA TGCCCGCACT GGTGGAAATC TTCGGTGATG ACTCCGTTCT CCAGTTCGGT
GGCGGCACCT TGGGTCACCC CTGGGGTAAT GCTCCTGGTG CAACCGCGAA CCGTGTTGCC
TTGGAAGCTT GCGTCCAAGC TCGGAACGAA GGTCGCGACC TCTACCGTGA AGGCGGCGAC
ATCCTTCGTG AAGCTGGCAA GTGGTCGCCT GAACTGGCTG CTGCCCTCGA CCTCTGGAAA
GAGATCAAGT TCGAATTCGA AACGATGGAC AAGCTCTAA
 
Protein sequence
MPKTQSAAGY KAGVKDYKLT YYTPDYTPKD TDLLAAFRFS PQPGVPADEA GAAIAAESST 
GTWTTVWTDL LTDMDRYKGK CYHIEPVQGE ENSYFAFIAY PLDLFEEGSV TNILTSIVGN
VFGFKAIRSL RLEDIRFPVA LVKTFQGPPH GIQVERDLLN KYGRPMLGCT IKPKLGLSAK
NYGRAVYECL RGGLDFTKDD ENINSQPFQR WRDRFLFVAD AIHKSQAETG EIKGHYLNVT
APTCEEMMKR AEFAKELGMP IIMHDFLTAG FTANTTLAKW CRDNGVLLHI HRAMHAVIDR
QRNHGIHFRV LAKCLRLSGG DHLHSGTVVG KLEGDKASTL GFVDLMREDH IEADRSRGVF
FTQDWASMPG VLPVASGGIH VWHMPALVEI FGDDSVLQFG GGTLGHPWGN APGATANRVA
LEACVQARNE GRDLYREGGD ILREAGKWSP ELAAALDLWK EIKFEFETMD KL