Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1426 |
Symbol | rbcL |
ID | 3773598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1479461 |
End bp | 1480879 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637799858 |
Product | ribulose bisophosphate carboxylase |
Protein accession | YP_400443 |
Protein GI | 81300235 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAAGA CGCAATCTGC CGCAGGCTAT AAGGCCGGGG TGAAGGACTA CAAACTCACC TATTACACCC CCGATTACAC CCCCAAAGAC ACTGACCTGC TGGCGGCTTT CCGCTTCAGC CCTCAGCCGG GTGTCCCTGC TGACGAAGCT GGTGCGGCGA TCGCGGCTGA ATCTTCGACC GGTACCTGGA CCACCGTGTG GACCGACTTG CTGACCGACA TGGATCGGTA CAAAGGCAAG TGCTACCACA TCGAGCCGGT GCAAGGCGAA GAGAACTCCT ACTTTGCGTT CATCGCTTAC CCGCTCGACC TGTTTGAAGA AGGGTCGGTC ACCAACATCC TGACCTCGAT CGTCGGTAAC GTGTTTGGCT TCAAAGCTAT CCGTTCGCTG CGTCTGGAAG ACATCCGCTT CCCCGTCGCC TTGGTCAAAA CCTTCCAAGG TCCTCCCCAC GGTATCCAAG TCGAGCGCGA CCTGCTGAAC AAGTACGGCC GTCCGATGCT GGGTTGCACG ATCAAACCAA AACTCGGTCT GTCGGCGAAA AACTACGGTC GTGCCGTCTA CGAATGTCTG CGCGGCGGTC TGGACTTCAC CAAAGACGAC GAAAACATCA ACTCGCAGCC GTTCCAACGC TGGCGCGATC GCTTCCTGTT TGTGGCTGAT GCAATCCACA AATCGCAAGC AGAAACCGGT GAAATCAAAG GTCACTACCT GAACGTGACC GCGCCGACCT GCGAAGAAAT GATGAAACGG GCTGAGTTCG CTAAAGAACT CGGCATGCCG ATCATCATGC ATGACTTCTT GACGGCTGGT TTCACCGCCA ACACCACCTT GGCAAAATGG TGCCGCGACA ACGGCGTCCT GCTGCACATC CACCGTGCAA TGCACGCGGT GATCGACCGT CAGCGTAACC ACGGGATTCA CTTCCGTGTC TTGGCCAAGT GTTTGCGTCT GTCCGGTGGT GACCACCTCC ACTCCGGCAC CGTCGTCGGC AAACTGGAAG GCGACAAAGC TTCGACCTTG GGCTTTGTTG ACTTGATGCG CGAAGACCAC ATCGAAGCTG ACCGCAGCCG TGGGGTCTTC TTCACCCAAG ATTGGGCGTC GATGCCGGGC GTGCTGCCGG TTGCTTCCGG TGGTATCCAC GTGTGGCACA TGCCCGCACT GGTGGAAATC TTCGGTGATG ACTCCGTTCT CCAGTTCGGT GGCGGCACCT TGGGTCACCC CTGGGGTAAT GCTCCTGGTG CAACCGCGAA CCGTGTTGCC TTGGAAGCTT GCGTCCAAGC TCGGAACGAA GGTCGCGACC TCTACCGTGA AGGCGGCGAC ATCCTTCGTG AAGCTGGCAA GTGGTCGCCT GAACTGGCTG CTGCCCTCGA CCTCTGGAAA GAGATCAAGT TCGAATTCGA AACGATGGAC AAGCTCTAA
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Protein sequence | MPKTQSAAGY KAGVKDYKLT YYTPDYTPKD TDLLAAFRFS PQPGVPADEA GAAIAAESST GTWTTVWTDL LTDMDRYKGK CYHIEPVQGE ENSYFAFIAY PLDLFEEGSV TNILTSIVGN VFGFKAIRSL RLEDIRFPVA LVKTFQGPPH GIQVERDLLN KYGRPMLGCT IKPKLGLSAK NYGRAVYECL RGGLDFTKDD ENINSQPFQR WRDRFLFVAD AIHKSQAETG EIKGHYLNVT APTCEEMMKR AEFAKELGMP IIMHDFLTAG FTANTTLAKW CRDNGVLLHI HRAMHAVIDR QRNHGIHFRV LAKCLRLSGG DHLHSGTVVG KLEGDKASTL GFVDLMREDH IEADRSRGVF FTQDWASMPG VLPVASGGIH VWHMPALVEI FGDDSVLQFG GGTLGHPWGN APGATANRVA LEACVQARNE GRDLYREGGD ILREAGKWSP ELAAALDLWK EIKFEFETMD KL
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