Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1422 |
Symbol | |
ID | 3773594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1475694 |
End bp | 1475993 |
Gene Length | 300 bp |
Protein Length | 99 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637799854 |
Product | carbon dioxide concentrating mechanism protein CcmL |
Protein accession | YP_400439 |
Protein GI | 81300231 |
COG category | [C] Energy production and conversion [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4576] Carbon dioxide concentrating mechanism/carboxysome shell protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0125943 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.634835 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCATTG CTAAGGTTCG CGGAACCGTA GTCAGTACCT ACAAAGAGCC CAGCCTGCAA GGGGTAAAGT TCTTGGTTGT TCAGTTCTTG GATGAGGCTG GACAGGCACT TCAAGAGTAT GAGGTTGCTG CTGACATGGT TGGCGCTGGC GTTGACGAGT GGGTGTTGAT TAGCCGCGGC AGTCAAGCGC GCCATGTGCG CGATTGTCAG GAACGACCGG TTGATGCAGC TGTCATTGCC ATCATCGATA CGGTCAACGT GGAAAACCGC TCCGTCTACG ACAAACGCGA GCACAGCTAA
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Protein sequence | MRIAKVRGTV VSTYKEPSLQ GVKFLVVQFL DEAGQALQEY EVAADMVGAG VDEWVLISRG SQARHVRDCQ ERPVDAAVIA IIDTVNVENR SVYDKREHS
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