| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1399 |
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| Symbol | |
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| ID | 3774112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 1450087 |
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| End bp | 1451241 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637799831 |
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| Product | hypothetical protein |
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| Protein accession | YP_400416 |
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| Protein GI | 81300208 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0516827 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.936893 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGATCA GCCTAGGCAT CTTGATTCTG CTCAGTGGTG TTGGCTTACT GTTTTACACC
TTGGCAACCA CTCGTGGTCG AGATGCAATT GTCAACGCCA AAGTTATCAC TTTGCAAGCC
CCTGATGATG GGATTGTGAC CGATTTTCAG ATACGACCGG GCGAAGAAAT TCCTGCTAAT
CAACCCCTTC TAAGGATTGA GAATCCTCGC ACAAGTACAT TTGAGCAAGC ACGCTTACAG
ACTCAGCTCG ATACTGAGCA GCAAAAACTA AAATTACAGC AAGATCAGTT GAGCAATATC
TCACAACTTC GCCAACAGGT CGAGCGTGAT AACCGCAATC AACGGCAACT CGAAATCAAT
AAGTTCACAG CGCAACGCCG CAAGTTGCAG GCTGATATTA ATGCAGCTCG TGAGCAATTG
GCATTAGCGA AACGAATTTA TGAACGCCGC CGCGACCTAG CTACCACAGG AGCTATCGCG
ATCGAAGTGG CTGATCAAGC AGAGACAGAC TATTTACGGC AACAAGATGC TCTCACAGCC
CTAACGAAAG AGCTGACCAG TCGGGAACAA GATTTAAAAG CAGCCCAATT GGGGCTAACT
TTAATTAATT CCCGCACCAA CTATGATCCG AGTGTTCGTC TACAGGAATT AAAGATTCAA
GAAACGCAGC TACGATCGCA GGTTGCAGCA CAGACAGCCC AAGTCAATGG TCTAAAAAAT
CAGTTACAGG AAATTACGCG TAACACGCGA TCGCGCCAGA ATATTCCGCT TTCAAGTCCT
GTTCCTACTG TTTTATGGCA GTCCTCAGTC AGTAATGGAG ACGTTGTCAC ACGAGGACAA
CCACTCGCAA AAACCATTGA CTGTCGCGAC CGTTGGATCG ATGTCTACAT CGGTGAAACG
GCTTTACGCC AAGTCCGAAT TGGTGAGTCT GCTCGCATTG ATTTGATTGG CAAAGATCAA
TCAATAACAG GCAAGGTTGC ATTTATTCGT TCTGGGGTTG GTCGTCTACG TATTGGTGAA
GATGTGCTGC CACTTGTACC GATTAATTTA GCGCGGGAAA GCCAGGTGAG AATTCAGTTA
GATCCTGATA ACGTTCAAGC TGCTGAATTT TGCTATGTGG GATTTACAGG TCGTGTTACT
TTCCAAAATT TTTAA
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| Protein sequence | MVISLGILIL LSGVGLLFYT LATTRGRDAI VNAKVITLQA PDDGIVTDFQ IRPGEEIPAN
QPLLRIENPR TSTFEQARLQ TQLDTEQQKL KLQQDQLSNI SQLRQQVERD NRNQRQLEIN
KFTAQRRKLQ ADINAAREQL ALAKRIYERR RDLATTGAIA IEVADQAETD YLRQQDALTA
LTKELTSREQ DLKAAQLGLT LINSRTNYDP SVRLQELKIQ ETQLRSQVAA QTAQVNGLKN
QLQEITRNTR SRQNIPLSSP VPTVLWQSSV SNGDVVTRGQ PLAKTIDCRD RWIDVYIGET
ALRQVRIGES ARIDLIGKDQ SITGKVAFIR SGVGRLRIGE DVLPLVPINL ARESQVRIQL
DPDNVQAAEF CYVGFTGRVT FQNF
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