Gene Synpcc7942_1371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1371 
Symbol 
ID3775565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1408205 
End bp1409368 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content56% 
IMG OID637799803 
Productmagnesium and cobalt transport protein CorA 
Protein accessionYP_400388 
Protein GI81300180 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID[TIGR00383] magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTCCC GCCGCAACAA TCATCGACAC CCTCGCAAGA CCAAGCGCCA GAATTTTCGC 
CACCGCCTGA CCAGTACGGT CTACCAAGCC CCAGGAACCT TGCGACAGCC ACTCGAGGCC
AGTCCAACTC AACTGCGGCA GATTGAGTAC AGCGCCAACC AGATCGTTAG CCGCCCGATC
TCGGATCCCT TGGACTTGGT TTCTGCGCGG ATGGGGGAAA CGGGCACCAC TTGGTTACAG
ATGCAAGGCT TCTCGGATTT GGAACAGTTG CGGAGTTTGG GGGAGGTGCT GGAGCTGAAT
CCACTCACTC TTGAGGACCT GATTGGTCAT CCCCAGCGGC CCAAGCAGGA ACGCTATCCC
CATTACCTAG AGGTGATTTT TTATCGACCT GACCTGCAGC CTGGCGATCG CCTCCGCCTC
GAACAGGTGG GGCTCGTTCT GGGCGATCGC TGGCTCCTCA CGGTGGAAGC AGACGAAATT
GGCCCCAATT TCTCTGGTTT GGAACAGCGG CTGGCCAATC GAACGGCTTA CCCCAGACTG
GAAGCGGATA CTTTGGCCTA CCTCGCGATC GATTGGATTA TCGACACCTA CTTCCCGGTG
CTTGAGGTCT TGGGTGAGGA ACTGGAGCAA CTAGAGGATG CAGTGGTAGC CCAACCAACT
CAGGCGCTGC TGTCAGATAT CTATGAGCTA CGGCGCGAAC TGATGGTGTT GCGGCGCGTC
GTCTGGCCGT TGCGGGATGT GATCAATGCC TTGATTCGCG ATCGCACACC CCTGATTCGG
GAGGAAGTGC GCATGGATCT GCGGGACTGT GCTGATCACG CCTACTTTTT GCTGGATACC
CTAGAAACCT ATCGGGATCT GGCTAACAAC TTGATGGAGG TCTATCTCTC GTCGATCAGC
AACCGCCTCA ACCAAGTCAT GAAGCTGTTA GCCATCCTTT CGACCGTATT CATGCCCCTG
ACCTTGATCG CCGGAATCTA CGGCATGAAT TTCAATCCTG AGGCGTCTCG CTGGAATATG
CCAGAACTAA ACTGGCCCTA CGGTTATCCG GCTGTGCTGC TGGCGATGGT GGCGATCGCG
ATCGTCTTAC TGTGGTTGTT TTGGCAGCGC GGCTGGTTTG AAGACTGGAG CAGGCCCAGC
TTCCGCTCTA GGCAAGACAC CTGA
 
Protein sequence
MGSRRNNHRH PRKTKRQNFR HRLTSTVYQA PGTLRQPLEA SPTQLRQIEY SANQIVSRPI 
SDPLDLVSAR MGETGTTWLQ MQGFSDLEQL RSLGEVLELN PLTLEDLIGH PQRPKQERYP
HYLEVIFYRP DLQPGDRLRL EQVGLVLGDR WLLTVEADEI GPNFSGLEQR LANRTAYPRL
EADTLAYLAI DWIIDTYFPV LEVLGEELEQ LEDAVVAQPT QALLSDIYEL RRELMVLRRV
VWPLRDVINA LIRDRTPLIR EEVRMDLRDC ADHAYFLLDT LETYRDLANN LMEVYLSSIS
NRLNQVMKLL AILSTVFMPL TLIAGIYGMN FNPEASRWNM PELNWPYGYP AVLLAMVAIA
IVLLWLFWQR GWFEDWSRPS FRSRQDT