Gene Synpcc7942_1365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1365 
Symbol 
ID3775559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1403362 
End bp1404060 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content51% 
IMG OID637799797 
Productmultiple antibiotic resistance (MarC)-related proteins 
Protein accessionYP_400382 
Protein GI81300174 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2095] Multiple antibiotic transporter 
TIGRFAM ID[TIGR00427] membrane protein, MarC family 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTTC CGTCCCAGGC TGCCTTTGCG ACAACCCTGT TTGCAATGCT CAATCCCTTG 
GGGATGCTGC CTGTTTTTAT TAGCTACACC GAGAGTGAGC GCCGACAAGT ACAACGCTGG
GCTGCGCTCT TTATCTCTCT GACAGTCTTT GCCCTTCTCA TCTTATTCCT GCTAACAGGA
TCCACGCTAC TAAGATTCTT TGGGATCAGC CTTTCATCAT TCCGAATTGC CGGAGGTATT
TTGTTGCTAT TGCTCGGCAT TAATCTCACA ATTGACAACA CTGCTAAACA GACACGGGCC
ATCGTCAAGC ATGAACAGGA AAGCAGTCTG CGGGCGGCAG AGTCCGTCTA TAAAAAGATT
GTGATTCCCT TGGCCGTACC CCTTTTGGTT GGTCCAGGAG CGATCGCTAA TGTCATTCTC
CACGGCACTC TGGCTGAAAC CGAGCAACAG TATGGGCTAT TGGCTGAGTT TGCGTTAATC
ATTGCCCTGA TATCTCTGCT CACGTTTATC ATTTTTCAGT CGGGGCGCTG GTTTCAAAAG
GTGATCGGGG ATGTTGGACT CTCGATTCTG ACCCGTATTC TGGGCCTACT CGTAGCAGCG
ATCGGAATTC AATTTCTAGT CGCTGGGGTG GCAGATGTTG CTGCTACTGT CGTTACGCCC
GCTGTGCTCC AACAGCTGCA GCGATCGCCC ATGCCTTAG
 
Protein sequence
MSFPSQAAFA TTLFAMLNPL GMLPVFISYT ESERRQVQRW AALFISLTVF ALLILFLLTG 
STLLRFFGIS LSSFRIAGGI LLLLLGINLT IDNTAKQTRA IVKHEQESSL RAAESVYKKI
VIPLAVPLLV GPGAIANVIL HGTLAETEQQ YGLLAEFALI IALISLLTFI IFQSGRWFQK
VIGDVGLSIL TRILGLLVAA IGIQFLVAGV ADVAATVVTP AVLQQLQRSP MP