Gene Synpcc7942_1272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1272 
Symbol 
ID3773561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1296234 
End bp1296761 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content57% 
IMG OID637799702 
Producthypothetical protein 
Protein accessionYP_400289 
Protein GI81300081 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.782817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.944747 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGC GGTGTTTTCA GCAAGCGATC GCAATTCAAG CCAGTTGCGC GGCGGTCGAG 
GCTTGCTTCC AGGATTTAGA GCTGATGCAT CGCTGGCTCA ACCCACTCCT GCGCTGTCGC
CCTGAGGGGG ACTGGAATCT CGATCGCGGT AGCCGCAACC GATTTCAGAT CCAAATTCCC
TTGATCTATC CCAGTCTGGA GTGTGTTGTT TGCGATCGCG CCGAAGGACT GATTGTCTGG
CAGTTTGAAG GATTTTTTCA GGGAACCGAC ACTTGGCGCT GGTGGCAGGA GGGTGAGCAC
ACCCAACTCG ACAATTGCTT CCGCTTCCGG ATTGCCAAGC CCTGGGTTGC TTGGGGCTTC
GATCGCGTCG CGGCCGGAGT CACACAACGA GATATGCAAG CCCAACTTCA GCGGCTTAAA
GCGATCGCAG AAACATTACC CGTCGCCTCG ACAGTGACAG ATAATCTGCC CAGTCCCAGC
CCCGAGGCCG CCGCTAGTCC ATCCACTCCA GCAGACCGTC CTCTCTAG
 
Protein sequence
MAERCFQQAI AIQASCAAVE ACFQDLELMH RWLNPLLRCR PEGDWNLDRG SRNRFQIQIP 
LIYPSLECVV CDRAEGLIVW QFEGFFQGTD TWRWWQEGEH TQLDNCFRFR IAKPWVAWGF
DRVAAGVTQR DMQAQLQRLK AIAETLPVAS TVTDNLPSPS PEAAASPSTP ADRPL