| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1237 |
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| Symbol | |
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| ID | 3773525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 1258978 |
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| End bp | 1260957 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637799666 |
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| Product | nitrate transport ATP-binding subunits C and D |
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| Protein accession | YP_400254 |
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| Protein GI | 81300046 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
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| TIGRFAM ID | [TIGR01184] nitrate transport ATP-binding subunits C and D |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGTTT TCTTAGCGGT TGACCACGTT CATCAGGTCT TTGACCTACC GGGTGGCGGA
CAATATATCG CCCTCAAAGA TGTCAGTTTG AATATTCGCC CCGGCGAATT TATCTCCTTG
ATTGGCCACT CCGGCTGTGG TAAATCGACG CTGCTCAACT TGATTGCTGG CCTTGCCCAA
CCCAGCAGCG GCGGCATCAT TCTTGAAGGT CGGCAGGTCA CGGAACCTGG CCCCGATCGC
ATGGTGGTTT TCCAGAACTA TTCGCTCTTA CCGTGGCGAA CTGTCCGCCA GAATATCGCC
CTTGCCGTCG ATAGTGTTCT GCACGATCGC AATCGCACCG AGCGCCGCAC GATTATCGAA
GAAACCATTG ATCTTGTTGG GTTGCGGGCC GCAGCCGACA AATATCCCCA CGAGATTTCC
GGCGGGATGA AACAGCGGGT CGCGATCGCA CGCGGCTTGG CGATTCGGCC CAAACTGCTA
CTCCTAGATG AACCCTTTGG TGCCTTGGAT GCCCTGACCC GTGGCAACCT GCAAGAGCAA
CTGATGCGGA TTTGCCAAGA GGCTGGTGTG ACGGCGGTGA TGGTCACCCA TGATGTCGAC
GAGGCATTGT TGCTCTCCGA TCGCGTCGTG ATGCTAACGA ACGGTCCCGC CGCCCAAATC
GGTCAGATTC TGGAAGTTGA TTTCCCCCGT CCCCGCCAAC GGCTGGAGAT GATGGAAACG
CCTCACTACT ACGATCTGCG CAACGAGCTG ATCAACTTCC TACAGCAACA GCGACGGGCC
AAGCGGCGAG CCAAAGCTGC AGCACCAGCT CCGGCTGTGG CAGCGTCGCA GCAGAAAACT
GTCCGACTGG GCTTTTTGCC CGGCAACGAC TGCGCTCCCT TGGCGATCGC TCAAGAATTG
GGTCTGTTCC AAGACCTCGG TCTGTCCGTG GAACTGCAGT CCTTCCTGAC CTGGGAGGCA
CTGGAAGACA GCATCCGGCT GGGGCAACTG GAGGGCGCCT TGATGATGGC GGCCCAGCCC
CTCGCCATGA CCATGGGTCT GGGGGGACAC CGGCCTTTCG CGATCGCAAC ACCCCTGACG
GTCAGCCGCA ACGGTGGGGC GATCGCCCTC TCCCGTCGCT ACCTCAACGC CGGTGTACGC
AGCCTCGAAG ATCTCTGCCA GTTCTTAGCT GCAACTCCCC AGCGATTGCG CCTCGCCATT
CCTGATCCAA TTGCCATGCC AGCCCTGCTG CTGCGCTATT GGTTGGCCAG CGCCGGCCTC
AACCCCGAGC AAGACGTTGA GCTGGTGGGA ATGTCGCCCT ACGAAATGGT GGAGGCACTC
AAAGCCGGTG ACATCGATGG CTTTGCGGCG GGTGAAATGC GGATTGCTCT CGCCGTCCAA
GCAGGAGCCG CCTACGTCCT AGCAACCGAT TTGGACATCT GGGCGGGACA TCCTGAGAAG
GTTTTGGGGC TGCCAGAAGC GTGGCTACAA GTGAATCCTG AAACCGCGAT CGCCCTTTGC
TCGGCCCTGC TCAAAGCCGG CGAACTCTGC GACGATCCTC GTCAGCGCGA TCGCATTGTC
GAGGTCTTGC AACAACCGCA ATATCTCGGG TCTGCTGCCG GCACGGTGCT ACAGCGCTAC
TTTGACTTTG GCTTGGGCGA TGAACCCACC CAAATTCTGC GCTTCAACCA ATTCCACGTC
GATCAGGCCA ACTACCCCAA TCCGCTCGAG GGCACTTGGC TGCTGACTCA GCTCTGCCGC
TGGGGTCTGA CGCCCTTACC CAAAAACCGG CAGGAATTGC TCGATCGCGT CTATCGCCGC
GATATCTACG AAGCCGCGAT CGCTGCCGTG GGCTTCCCGC TCATCACTCC CAGTCAGCGA
GGCTTCGAAC TCTTCGATGC GGTGCCCTTC GACCCCGATA GCCCGCTGCG CTACCTCGAA
CAATTCGAGA TCAAAGCGCC GATTCAGGTT GCTCCCATTC CGCTTGCTAC CTCTGCCTAG
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| Protein sequence | MSVFLAVDHV HQVFDLPGGG QYIALKDVSL NIRPGEFISL IGHSGCGKST LLNLIAGLAQ
PSSGGIILEG RQVTEPGPDR MVVFQNYSLL PWRTVRQNIA LAVDSVLHDR NRTERRTIIE
ETIDLVGLRA AADKYPHEIS GGMKQRVAIA RGLAIRPKLL LLDEPFGALD ALTRGNLQEQ
LMRICQEAGV TAVMVTHDVD EALLLSDRVV MLTNGPAAQI GQILEVDFPR PRQRLEMMET
PHYYDLRNEL INFLQQQRRA KRRAKAAAPA PAVAASQQKT VRLGFLPGND CAPLAIAQEL
GLFQDLGLSV ELQSFLTWEA LEDSIRLGQL EGALMMAAQP LAMTMGLGGH RPFAIATPLT
VSRNGGAIAL SRRYLNAGVR SLEDLCQFLA ATPQRLRLAI PDPIAMPALL LRYWLASAGL
NPEQDVELVG MSPYEMVEAL KAGDIDGFAA GEMRIALAVQ AGAAYVLATD LDIWAGHPEK
VLGLPEAWLQ VNPETAIALC SALLKAGELC DDPRQRDRIV EVLQQPQYLG SAAGTVLQRY
FDFGLGDEPT QILRFNQFHV DQANYPNPLE GTWLLTQLCR WGLTPLPKNR QELLDRVYRR
DIYEAAIAAV GFPLITPSQR GFELFDAVPF DPDSPLRYLE QFEIKAPIQV APIPLATSA
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