Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1233 |
Symbol | |
ID | 3773521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1253790 |
End bp | 1254473 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637799662 |
Product | hypothetical protein |
Protein accession | YP_400250 |
Protein GI | 81300042 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0271776 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTGGC ATTTTCTTAG ACTTTCCCTG GAACGCCCCT ACAATCAGCT ATTGTTTATT CTTGTTGCGA TAATCTCTGT TGGGATTATC TTCAAGATCA ACCCAATTGC AACAATTGCT GTTTCTTTTA TCCTGTTTAG CAGCTTGCTA CAAGTCATCA AAATTGCACG CCCCTCACTG CAGACATCCA AGTCCCTACT TAGGTTTTCC CTATTAACTT TCAGCATTAT TGTCATCAAT GAATTAGGAG TTCTACAACC CTTTCCCGGT CTTAGTGAAA TTTTTCGATT TGTTACCCTT ATCGCCCTAT CAGTTTTTTT GAGTCTTGTA ATTATACTGC TGATCAAAAC TCTAATGCAT GAGTCGCAAG TCACTGCCGA CCTCGTCAAA GGAGGTATTT GTATCTATTT TTTAGTTGCA ATTCTTTGGT CGCTCCTCTA TGAGGCGATC GCTGTTTTTG ATCCTCTCGC TTTCTTGATA TTGCCGGAGC ACAAAGACAA TAATCCTTAT GTTTACTTCA GCTTTATCAC GCTGACCAGC ACAGGCTTCG GGGATATTTT GCCAATCAAT CCGGTTGCAA AACTGCTAGC TAGCTTTGAA GCAATGTTTG GGCAACTCTA TCTGGCGATC GTGATTGCTC GTTTGGTCAG TCTTTACAGC AGTCAAAATT CGTCGGACTC CTAG
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Protein sequence | MKWHFLRLSL ERPYNQLLFI LVAIISVGII FKINPIATIA VSFILFSSLL QVIKIARPSL QTSKSLLRFS LLTFSIIVIN ELGVLQPFPG LSEIFRFVTL IALSVFLSLV IILLIKTLMH ESQVTADLVK GGICIYFLVA ILWSLLYEAI AVFDPLAFLI LPEHKDNNPY VYFSFITLTS TGFGDILPIN PVAKLLASFE AMFGQLYLAI VIARLVSLYS SQNSSDS
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