| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1186 |
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| Symbol | |
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| ID | 3775492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1215652 |
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| End bp | 1216350 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637799613 |
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| Product | putative riboflavin-specific deaminase |
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| Protein accession | YP_400203 |
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| Protein GI | 81299995 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.107743 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGTTG TTGCGGTACT CGCCACCAGT TTGGATGGCC GGATTGCGGA AGCGGCGGCT
GTTCCAGCCC GCTTTGGTTC AGCACAAGAT CAACGGCGCT TAGAAACGAT CGTGGCGCAA
TCGGATGCTG TACTGATGGG CGCGGCCACG CTGAGAGCCT ATGGCACTTG CCGCTCGGTC
ACGAATCCGC AGTTGCAACA ACAACGTCGC GATCGCGGTC AATCACCGCA ACCTGTGCAG
ATCATTTGCT CGGCTTCGGG GCAGATCGAG CCAGCCTGCC GCTTTTTTCA GCAGCCGGTG
CCGCGCTGGT TATTGACCAC AGAACAGGGC CGCGATCGCT GGCGACAAGA GTCTGGCTTC
GAAGCGGTTC TGATCGCCGG TCAGACGCAA CTGGACTGGG AGCAGGCTTT TGCACAATTC
GATCTGAGCT GGCAACAAAT TGCAGTGCTC GGTGGCGGTC AATTGCTCGG TAGTCTGCTG
GCGGCAGACC GAATCGACGA GCTGTATCTG ACCCTCTGCC CGTTACTCTT GGGCGATTGC
CCAGCCTCAC CACTTGTTGC CGGACTTCAT TTCTCTGCAG CTGATGCCCC ACGCTGGCAG
CTCCTCAGTG CTGAGCCAGT GGCCGATGAG CTGTTCTTGC ATTACCGCTG TACTGAGTCA
GACGCGATAG GCTCAAAGGC GTTAACGTCA GCCTCCTAG
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| Protein sequence | MRVVAVLATS LDGRIAEAAA VPARFGSAQD QRRLETIVAQ SDAVLMGAAT LRAYGTCRSV
TNPQLQQQRR DRGQSPQPVQ IICSASGQIE PACRFFQQPV PRWLLTTEQG RDRWRQESGF
EAVLIAGQTQ LDWEQAFAQF DLSWQQIAVL GGGQLLGSLL AADRIDELYL TLCPLLLGDC
PASPLVAGLH FSAADAPRWQ LLSAEPVADE LFLHYRCTES DAIGSKALTS AS
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