Gene Synpcc7942_1179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1179 
Symbol 
ID3775485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1211113 
End bp1211529 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content59% 
IMG OID637799606 
Productrubredoxin 
Protein accessionYP_400196 
Protein GI81299988 
COG category[C] Energy production and conversion 
COG ID[COG1773] Rubredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACAC CTGAAGCTTC TACCCCGCTG GCCAACACCG AGCCTGAGCC GGTAGAAGAG 
GGCACCCCCG AGGCAGCTGC CGAAACGTCG GAGACGAAGC CACTCGTGTT CCTCGATCGT
CACGAGTGTC GATCCTGTGG CTACATCTAC GAACCCAATG AGGGAGACCC ACGCCGCCAA
ATCGCCGCAG GGACTGTGTT TGAAGAAGTG CCCTCTAACT GGCGCTGCCC AATTTGCGGC
AGTCCTCGGA GTCAGTTTCG CAACATTGGT CCCAAGGGAA TCCCCTCTGG TTTCAGCGAG
AACTTGGGCT ACGGCCTCGG CGTGAATACC CTGACCCCAG GCCAAAAAAA CCTGCTGATC
TTCGGCGCGC TTGGCCTTGC TGTCCTCTTC TTCCTCAGCC TGTACGGCCT GAACTAA
 
Protein sequence
MDTPEASTPL ANTEPEPVEE GTPEAAAETS ETKPLVFLDR HECRSCGYIY EPNEGDPRRQ 
IAAGTVFEEV PSNWRCPICG SPRSQFRNIG PKGIPSGFSE NLGYGLGVNT LTPGQKNLLI
FGALGLAVLF FLSLYGLN