| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1171 |
|---|
| Symbol | |
|---|
| ID | 3775477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 1204598 |
|---|
| End bp | 1206109 |
|---|
| Gene Length | 1512 bp |
|---|
| Protein Length | 503 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637799598 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_400188 |
|---|
| Protein GI | 81299980 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3046] Uncharacterized protein related to deoxyribodipyrimidine photolyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGTCG GCATTTGGAT TCTAGGCGAT CAGCTGACTC TGCAGCATCC GGCACTGAGT
TCCAGGGCAG TTGATCAGTC GCAGACACGA ATTCTGTTGG TTGAATCACT CGAACATGCT
CAACGGCGAC CCTACCACCG ACAAAAGCTG GTGTTGCTTT GGTCGGCGAT GCGTCACTTT
GCAGACGAAC TGCGATCGCA GGGCTGGACA GTGGACTATG TCGAGCAGGC AGATAGCTTT
CAAACGGCCG TATCAGCTTG GTGCCAACAG TATCAAATTG CTGAGCTGCA GGTGATGGAA
CCCGCCGATC GCTCGTTTCG CGCAATTATC AGCAGTCTTG AATTGACCAG CAGTCTGCAT
TGGTTGTCAA ATTGCCAATT TCTTTGGTCA ACGGCTGAAT TTACCGCTTG GGCCAAGCCC
TATCGACAGC TCCGGCTCGA GAATTTTTAT CGCGAAGGTC GCAAGCGCTG GCAAGTTTTA
CTGACTGAAG ATCAGGAGCC TATCGGGGGG CAATGGAACT TTGATCCAGA GAATCGTAAG
CCTCCTAAAA CTGGGCTGCA GCCACCGCCA GCTGCTCATT TTTTGCCAGA TGCGATCACG
CAAACAGTCA TTGAAACTGT GCGATCGCTA GAGTTGCCTC TCTACGGAAA GCTGGAACCT
TTTCATTGGC CGGTGACGCG ATCGCAGGCA TTGGAAGCCT TGGATCAGTT TTTAACCGTT
AAGCTCAAAA CCTTTGGCCC TTATCAGGAT GCGATGGTCA GCGGCCAAGC CACGATGTGG
CATAGCTTGA TTGCGCCAGC ACTGAACTTA GGACTGTTAC ATCCACTCGA AGTCATTCGC
CAAACTGAAC AGGCCTTCCA CAATAATCAA GCTCCGATCG CCAGTGTTGA AGGCTTTATT
CGCCAAATTC TGGGCTGGCG AGAATATATG TACGGTCTTC ATCACTATTT CCCTGATACC
TACGGGCAAT CAAATTGGTT TGAGCACGAT CGCCCTCTGC CTGAATTCTT TTGGACGGGT
CAAACCGATC TCCATTGCCT CCAACAGTGT TTTCAGCAGA TTGAAGCGAT CGGCTATAGC
CATCACATTC AGCGGTTGAT GATTCTCGCG AACTTTGCTT TGATTGCTGG ACTTGATCCT
TGGGCAGTCA AAGAGTGGTT TCAGGCAACC CATCTTGATG CCTACGACTG GGTGATGGAG
ACGAATGTGC TCGGCATGGG ACTTTTTGCA GATGGCGGAA AGCTTGCCTC AAAACCCTAT
GCAGCTTCAG CAAATTACAT CAATCGGATG AGCAATTACT GTCAAAATTG TCGCTATGAC
CCTAAACAAC GATTGGGCGA TCGCGCTTGT CCTTTCAATG CACTGTACTG GGATTTTCTC
GATCGCCACG AGCAAAAACT GCAAGCACAA GGACGCATGG GCTTAATTCT CAAACAGCTC
CAAAAACTGC CAGACAGCGA TCGGGCCGCA ATTCGCGACC AAGCGGCTCA CTGGCAAGCA
TCTTGGGATT AA
|
|---|
| Protein sequence | MTVGIWILGD QLTLQHPALS SRAVDQSQTR ILLVESLEHA QRRPYHRQKL VLLWSAMRHF
ADELRSQGWT VDYVEQADSF QTAVSAWCQQ YQIAELQVME PADRSFRAII SSLELTSSLH
WLSNCQFLWS TAEFTAWAKP YRQLRLENFY REGRKRWQVL LTEDQEPIGG QWNFDPENRK
PPKTGLQPPP AAHFLPDAIT QTVIETVRSL ELPLYGKLEP FHWPVTRSQA LEALDQFLTV
KLKTFGPYQD AMVSGQATMW HSLIAPALNL GLLHPLEVIR QTEQAFHNNQ APIASVEGFI
RQILGWREYM YGLHHYFPDT YGQSNWFEHD RPLPEFFWTG QTDLHCLQQC FQQIEAIGYS
HHIQRLMILA NFALIAGLDP WAVKEWFQAT HLDAYDWVME TNVLGMGLFA DGGKLASKPY
AASANYINRM SNYCQNCRYD PKQRLGDRAC PFNALYWDFL DRHEQKLQAQ GRMGLILKQL
QKLPDSDRAA IRDQAAHWQA SWD
|
|---|
| |