Gene Synpcc7942_1093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1093 
SymbolanmK 
ID3775043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1110644 
End bp1111780 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content56% 
IMG OID637799519 
Productanhydro-N-acetylmuramic acid kinase 
Protein accessionYP_400110 
Protein GI81299902 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2377] Predicted molecular chaperone distantly related to HSP70-fold metalloproteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0613535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0000150112 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTGTTT TGGGATTGAT CAGTGGCACC AGTGCCGATG GCATTGATGT AGCGATCGCG 
GAAATTCAGG GTTTTCAGGC AGACTTAAGC GTTGCGCTAC TGGCCTTTGA GACGATTGCC
TACGAACCGA GCCTGCGCGA TCGCATTTTG GAAGTCGCAG CCGGATTTCC GCTGAGCGTG
GCGGAATTGA CCGCACTCGA CGCTGCGATC GCTCAAGCCT TTGCGACAGC AGCCCAAACC
TTGATTCAGC AGCATGGTGC AGTGGATCTG ATCGGGTCTC ACGGCCAGAC GGTTTACCAT
CAGCCGCCGC AAGCAGGGCA ACTAGGCTGG AGTGTGCAGT TGGGCTGGGG AGCTGCGATC
GCCCAGCAGA CAGGGATTAC AACGGTCAGC AACTTCCGCA GTGCCGATCT GGCGTTGGGC
GGTCAGGGAG CCCCCCTCGT TCCTGCAGTA GACCTGTGGT TGTTAGGCAG TGATTCCGAA
AATCGTTGTG TGCAGAATAT TGGTGGCATC GGTAATCTCA CCTGGCTGCC GCGCCGCGAT
CACCCTGACT GGCAGTCGGA AGTCCGCGGT TGGGATACCG GCCCTGGTAA TTCCCTGCTG
GATCTGGCGG TGCAAAAACT GAGCCAAGGT CGGCTCTCCT ACGATGACGG TGGTCAGTGG
GCCGCAACTG GACAGATCGA TCAGGTGCTC TGCGATCGCT GGTTGCAGGA GGATGACTAT
TTCCGCTTGC CGCCGCCAAA ATCGACAGGA CGCGAACGCT ACGGTTGGCA GTTTTTAGAG
ACTTGGGCGG CAGAACTCGA TCGCCTCACA GCTGCGGATC AACTGGCAAC TTTGACAGAA
TTTACTGCTG CCAGCATTGT TAATAACTAT CGCCACTTTT TGCCAGCTTT ACCCGATCGC
GTTTTGGTCT GTGGCGGTGG GTTACATAAT CAATTTTTGC TGCAGCGATT ACAGCAGCAA
TTACCAACAG TGAAGATCGC GAGTACGGAT GATTTTGGGG TCAACTCCCA AGCCAAGGAA
GCGATCGCGA TCGCGGTTCT AGCCTATTGG CGACAGCACA ACGTTCCTGG CAATTTGCCG
GCAGTGACTG GGGCGTCGGG TCCTGCCTTA CTAGGCGATG TTTTTGCTCG AACCTAA
 
Protein sequence
MRVLGLISGT SADGIDVAIA EIQGFQADLS VALLAFETIA YEPSLRDRIL EVAAGFPLSV 
AELTALDAAI AQAFATAAQT LIQQHGAVDL IGSHGQTVYH QPPQAGQLGW SVQLGWGAAI
AQQTGITTVS NFRSADLALG GQGAPLVPAV DLWLLGSDSE NRCVQNIGGI GNLTWLPRRD
HPDWQSEVRG WDTGPGNSLL DLAVQKLSQG RLSYDDGGQW AATGQIDQVL CDRWLQEDDY
FRLPPPKSTG RERYGWQFLE TWAAELDRLT AADQLATLTE FTAASIVNNY RHFLPALPDR
VLVCGGGLHN QFLLQRLQQQ LPTVKIASTD DFGVNSQAKE AIAIAVLAYW RQHNVPGNLP
AVTGASGPAL LGDVFART