Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0986 |
Symbol | |
ID | 3775375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 995080 |
End bp | 996231 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637799405 |
Product | glycosyltransferase |
Protein accession | YP_400003 |
Protein GI | 81299795 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.075214 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGGATTG CTTGGCTGGG TAAGAAGTCT CCTTTCTGCG GCAACGTCAC CTACAGTCGA GAAATTACCA ACGCGCTGCG CGATCGCGGC CACGATGTCA GCTTTTTCCA CTTTGCCCAA AGTGAAGCTG AAGCCAGTGA TGAGGGAAGT GAGGGCATAG AAGTCTCGCT GCCCTGCCTC TACAAATCTC AGATTTATAC AATCCCGTCC TTTCGTTCCA GCAAAGTTCT TAAGTCTTCG CTGGAAGAAA TTCGCCCTGA TCTCGTCCAC GCTTCACTGA CGCTCTCGCC GCTGGATTTT CTGCTGCCAG AGATCTGTGA AGAACTGGGG CTACCGTTGG TAGCGACCTT CCATCCCGCT TTTGACCATA AGCTCCGCAA TATTTCTTCG GGCACGCAGC ACCTGACTTA TCAGCTCTAC GCACCCTGTC TCGCCCGCTA CGATCGCACG GTCGTTTTCT CCCAAATCCA GCGAGATTTA TTGATTCGGC TGGGGGTTCC GAGCGATCGC ATTGCCGTGA TTCCGAACGG GGTCGATATC GATCGCTATA GCCCTGGGCC CTCGGACTTC AAGCAACAAC TCGGGGTCGA TCGCCTGTTT GTCTACATGG GGCGAATTGC GGCTGAGAAA AATGTGGAAG CCCTACTCCG GGGCTGGAAG CTGGCAAATT TGGGGCCGGA AAGCCGCTTG TTGATTGTTG GGGACGGTAC GCTGCGATCG CTGCTAGAAG TCAGTTATGG CCCTGAGCAA GGGGTGCAGT GGTGGGGATT TGAGGCCGAT GAGCAACGCC GTATCCAAAT GCTGCGTGCC GCGGATGCCT TCATCCTGCC CTCTTTTGTG GAAGGACTAT CGCTCTCCTT GTTAGAGGCG ATGGCCTGCG GTGTGGCTTG CCTCGCCACC GATGCGGGTG CCGATGGGGA AGTGTTGGAA GGCGGCGCCG GCATTGTGCT CAATCCGCAG CGGACCTCCG CTCAGCTCCA GACACTGTTG CCTGTTCTGC GCGACCAACC GGAACTCAGC GCCATTTTGG GTTGTAAGGC GCGCCAGCGG GTGCTCGATC GCTACACCCT TGAGGGCAAC CTCGATCGCC TCGAACAGCT CTATCAAGAC CTCTTGCCAG CTGCAGTGCT GTCCGCAAGT GCCGTTTCCT AA
|
Protein sequence | MRIAWLGKKS PFCGNVTYSR EITNALRDRG HDVSFFHFAQ SEAEASDEGS EGIEVSLPCL YKSQIYTIPS FRSSKVLKSS LEEIRPDLVH ASLTLSPLDF LLPEICEELG LPLVATFHPA FDHKLRNISS GTQHLTYQLY APCLARYDRT VVFSQIQRDL LIRLGVPSDR IAVIPNGVDI DRYSPGPSDF KQQLGVDRLF VYMGRIAAEK NVEALLRGWK LANLGPESRL LIVGDGTLRS LLEVSYGPEQ GVQWWGFEAD EQRRIQMLRA ADAFILPSFV EGLSLSLLEA MACGVACLAT DAGADGEVLE GGAGIVLNPQ RTSAQLQTLL PVLRDQPELS AILGCKARQR VLDRYTLEGN LDRLEQLYQD LLPAAVLSAS AVS
|
| |