Gene Synpcc7942_0986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0986 
Symbol 
ID3775375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp995080 
End bp996231 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content57% 
IMG OID637799405 
Productglycosyltransferase 
Protein accessionYP_400003 
Protein GI81299795 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.075214 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATTG CTTGGCTGGG TAAGAAGTCT CCTTTCTGCG GCAACGTCAC CTACAGTCGA 
GAAATTACCA ACGCGCTGCG CGATCGCGGC CACGATGTCA GCTTTTTCCA CTTTGCCCAA
AGTGAAGCTG AAGCCAGTGA TGAGGGAAGT GAGGGCATAG AAGTCTCGCT GCCCTGCCTC
TACAAATCTC AGATTTATAC AATCCCGTCC TTTCGTTCCA GCAAAGTTCT TAAGTCTTCG
CTGGAAGAAA TTCGCCCTGA TCTCGTCCAC GCTTCACTGA CGCTCTCGCC GCTGGATTTT
CTGCTGCCAG AGATCTGTGA AGAACTGGGG CTACCGTTGG TAGCGACCTT CCATCCCGCT
TTTGACCATA AGCTCCGCAA TATTTCTTCG GGCACGCAGC ACCTGACTTA TCAGCTCTAC
GCACCCTGTC TCGCCCGCTA CGATCGCACG GTCGTTTTCT CCCAAATCCA GCGAGATTTA
TTGATTCGGC TGGGGGTTCC GAGCGATCGC ATTGCCGTGA TTCCGAACGG GGTCGATATC
GATCGCTATA GCCCTGGGCC CTCGGACTTC AAGCAACAAC TCGGGGTCGA TCGCCTGTTT
GTCTACATGG GGCGAATTGC GGCTGAGAAA AATGTGGAAG CCCTACTCCG GGGCTGGAAG
CTGGCAAATT TGGGGCCGGA AAGCCGCTTG TTGATTGTTG GGGACGGTAC GCTGCGATCG
CTGCTAGAAG TCAGTTATGG CCCTGAGCAA GGGGTGCAGT GGTGGGGATT TGAGGCCGAT
GAGCAACGCC GTATCCAAAT GCTGCGTGCC GCGGATGCCT TCATCCTGCC CTCTTTTGTG
GAAGGACTAT CGCTCTCCTT GTTAGAGGCG ATGGCCTGCG GTGTGGCTTG CCTCGCCACC
GATGCGGGTG CCGATGGGGA AGTGTTGGAA GGCGGCGCCG GCATTGTGCT CAATCCGCAG
CGGACCTCCG CTCAGCTCCA GACACTGTTG CCTGTTCTGC GCGACCAACC GGAACTCAGC
GCCATTTTGG GTTGTAAGGC GCGCCAGCGG GTGCTCGATC GCTACACCCT TGAGGGCAAC
CTCGATCGCC TCGAACAGCT CTATCAAGAC CTCTTGCCAG CTGCAGTGCT GTCCGCAAGT
GCCGTTTCCT AA
 
Protein sequence
MRIAWLGKKS PFCGNVTYSR EITNALRDRG HDVSFFHFAQ SEAEASDEGS EGIEVSLPCL 
YKSQIYTIPS FRSSKVLKSS LEEIRPDLVH ASLTLSPLDF LLPEICEELG LPLVATFHPA
FDHKLRNISS GTQHLTYQLY APCLARYDRT VVFSQIQRDL LIRLGVPSDR IAVIPNGVDI
DRYSPGPSDF KQQLGVDRLF VYMGRIAAEK NVEALLRGWK LANLGPESRL LIVGDGTLRS
LLEVSYGPEQ GVQWWGFEAD EQRRIQMLRA ADAFILPSFV EGLSLSLLEA MACGVACLAT
DAGADGEVLE GGAGIVLNPQ RTSAQLQTLL PVLRDQPELS AILGCKARQR VLDRYTLEGN
LDRLEQLYQD LLPAAVLSAS AVS