Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0979 |
Symbol | |
ID | 3775367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 988074 |
End bp | 988577 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637799398 |
Product | hypothetical protein |
Protein accession | YP_399996 |
Protein GI | 81299788 |
COG category | [S] Function unknown |
COG ID | [COG2318] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.000162275 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0303129 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAGTC CGTCCTATTG TCAGCAAATG GCTGCTTACA ACCAGCACCT GAATCAACAG ATCATCGCCG TCTGCCACAC ACTCTCCCAA GTAGAACTGG ATCGCGATCG CGGGGCTTTT TTTGGATCGA TTCAAGCCAC TCTAAATCAC CTATATTTCG GCGATCGCAT CTGGCTGGGC CGCTTTCAGC GACAGCCCTA TCACGCCCCC AACCTGGGTC ACGAGCTATT TACCCAATTC GCCGAGTACT GTCAGGCTCG TCAAGACTGC GATGATCAAA TTCTGAGTTG GGCCCATGAC CTTACGGATG ATTGGCTCAG TCAAGATTTG GAGTACCACA GCCCGCTTTA CCAGCAGACC ATCATTCGTC CCCAGTGGTT TTTAGTAACC CACCTGTTTA ACCACCAAAC CCATCACCGC GGACAAATCA CTACTTTGCT GAGTCAACTG GGGCTCGATG TAGGCGTCAC CGATCTGCCC TGGGTCGTAT CACCCTTGCG ATGA
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Protein sequence | MISPSYCQQM AAYNQHLNQQ IIAVCHTLSQ VELDRDRGAF FGSIQATLNH LYFGDRIWLG RFQRQPYHAP NLGHELFTQF AEYCQARQDC DDQILSWAHD LTDDWLSQDL EYHSPLYQQT IIRPQWFLVT HLFNHQTHHR GQITTLLSQL GLDVGVTDLP WVVSPLR
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