Gene Synpcc7942_0979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0979 
Symbol 
ID3775367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp988074 
End bp988577 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content52% 
IMG OID637799398 
Producthypothetical protein 
Protein accessionYP_399996 
Protein GI81299788 
COG category[S] Function unknown 
COG ID[COG2318] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.000162275 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0303129 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGTC CGTCCTATTG TCAGCAAATG GCTGCTTACA ACCAGCACCT GAATCAACAG 
ATCATCGCCG TCTGCCACAC ACTCTCCCAA GTAGAACTGG ATCGCGATCG CGGGGCTTTT
TTTGGATCGA TTCAAGCCAC TCTAAATCAC CTATATTTCG GCGATCGCAT CTGGCTGGGC
CGCTTTCAGC GACAGCCCTA TCACGCCCCC AACCTGGGTC ACGAGCTATT TACCCAATTC
GCCGAGTACT GTCAGGCTCG TCAAGACTGC GATGATCAAA TTCTGAGTTG GGCCCATGAC
CTTACGGATG ATTGGCTCAG TCAAGATTTG GAGTACCACA GCCCGCTTTA CCAGCAGACC
ATCATTCGTC CCCAGTGGTT TTTAGTAACC CACCTGTTTA ACCACCAAAC CCATCACCGC
GGACAAATCA CTACTTTGCT GAGTCAACTG GGGCTCGATG TAGGCGTCAC CGATCTGCCC
TGGGTCGTAT CACCCTTGCG ATGA
 
Protein sequence
MISPSYCQQM AAYNQHLNQQ IIAVCHTLSQ VELDRDRGAF FGSIQATLNH LYFGDRIWLG 
RFQRQPYHAP NLGHELFTQF AEYCQARQDC DDQILSWAHD LTDDWLSQDL EYHSPLYQQT
IIRPQWFLVT HLFNHQTHHR GQITTLLSQL GLDVGVTDLP WVVSPLR