| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0967 |
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| Symbol | hemC |
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| ID | 3775355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 974099 |
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| End bp | 975061 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637799386 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_399984 |
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| Protein GI | 81299776 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.219304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.534039 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTCTCCA GCCCTGCCCG TCCGATTCGT ATTGGCTCTC GCAAAAGCCA ACTAGCCTTG
GTGCAAACCC ACTGGGTGCA AGGCGAACTG CAACGGCTCT ATCCCGATCG CCAGTTCGAT
GTGCAGACGA TGAGTACCCA AGGCGACATC ATTCTGGATG TGGCGCTGGC CAAGATTGGT
GACAAAGGAT TGTTCACCAA AGAACTAGAA GTTGCCATGC TGGCGGGCGA AGTGGATTTT
GCCGTCCACT CTCTCAAAGA TTTGCCGACG CGCCTGCCCG AAGGCTTAAT CCTTGGCTGT
GTCACCGAGC GGGAAGATCC GGCGGATGCC CTGGTCGTCC ACGATCGCTT CAAGGATCAT
CAGCTCGAAA CTCTGCCCGA AGGCACCGTG ATTGGCACCT CGTCGCTGCG CCGTTTGGCT
CAGTTACGCC ACCACTATCC ACACCTGCAG TTCAAGGATG TGCGGGGTAA CCTCAACACC
CGCCTCGCCA AATTGGATGC CGGTGAATAC GATGCGCTGA TTCTGGCAGC GGCTGGCTTG
CAACGCCTGA GCATGGCCGA TCGCATTCAC CAGTTGATTC CCGCAGCAGT CTCGCTCCAT
GCCGTGGGTC AAGGCGCGCT GGGGATCGAA TGCCGCGCTG AAGATCCCGA AATCCTAGAA
CTGCTCAAAG CGCTAGAGCA CGAACCCACG TCGCAGCGTT GTTTGGCAGA ACGGGCCTTC
CTGCGGGAAC TGGAAGGCGG CTGCCAAGTC CCGATCGGCG TCAACACCGC GATCGCGGAT
GGCACCCTGA CCCTGACGGG CATGGTCGCT AGCTTGGATG GCCAACGCCT ACTGCGCGAT
CAAGTCAGCG GCCCCACCAG CGATCCAGAG GCACTGGGCT TGGCGCTAGC TGCTCAGCTC
AAAGCCCAAG GTGCGAAGGA AATTCTCGAC GAGATTTTCG CGACTGTTCG CCCTGAAGCT
TAG
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| Protein sequence | MVSSPARPIR IGSRKSQLAL VQTHWVQGEL QRLYPDRQFD VQTMSTQGDI ILDVALAKIG
DKGLFTKELE VAMLAGEVDF AVHSLKDLPT RLPEGLILGC VTEREDPADA LVVHDRFKDH
QLETLPEGTV IGTSSLRRLA QLRHHYPHLQ FKDVRGNLNT RLAKLDAGEY DALILAAAGL
QRLSMADRIH QLIPAAVSLH AVGQGALGIE CRAEDPEILE LLKALEHEPT SQRCLAERAF
LRELEGGCQV PIGVNTAIAD GTLTLTGMVA SLDGQRLLRD QVSGPTSDPE ALGLALAAQL
KAQGAKEILD EIFATVRPEA
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