| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0874 |
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| Symbol | |
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| ID | 3774051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 874390 |
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| End bp | 877449 |
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| Gene Length | 3060 bp |
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| Protein Length | 1019 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637799290 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_399891 |
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| Protein GI | 81299683 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00587786 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0126455 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTGC TGCACGGTGG CTGGCTCGGC GATCGCTTCT GCGTTTGGGC CGAGGCTTGG
CAGGCTGGTG AGCCTCAGTC GGCAGCAGAA ATTGCGATTC ATCCCTACGC GATCGCGGCC
ACTGACTTAA ATGATTGGTG CCAGAAGTAC CGTCTGGGAT CCCTGACGGG GACGCCAACA
GAAGTCCTGC TCTCTATTCC CAGTGACCTG AAGAAAGAGG CGGTTCTACC GTTTCTGAGT
GGTCAGGAAA TTCCAGATGG GGCGCTGCTT TGGTCTTGGC AGATCCCCGT GCTGTCACTA
GAAGCCGCGA TCGCCGGTCA ATGGCTGGCG ACCTTGCCGC TGGGTTCGGC GGAGGATCAT
CCTTGGCTGG GGCCAGATCT ACGCTTTTGG AGCCACATCT ACCGCTGGGC ACAAAGTTTG
CTGGCTCGGG GGCGCTTTTA TCCGGCGCTG GAGTCGAGCG ATCGCGGTTT AACGGCAGTT
TGGTTGCCAC TGTTTAATCA AGCGGGCGAT CGCCAGCGCT TCGATCGCTA TAGTCAGCAG
CTGCCCTTTA GTCAGTTTTG CTATCAGGCA ATCGAAACAG CGGCAGCTTG TCCTTGGCAG
CCTCAACCGC AGGATCTGTT GCTGCGAGTC CTACAGACTT GGTTGACAGC ACGACTACAA
CCGGCGATCG CGGCGGGAAC TCTCGTGTCT GCTGATCTGC TGGCGGCTTG GCAGCAATCG
CTAGCGAATG GAAAACCGCT AAAGCTAGAA GACAGTGAAG CCAGTCGCTT GCAAACGGCG
ATCGATCGCT GGTTACTACC AGTGCAGAAT GGCGCAGCTC AGGCTTGGCG GATGGTTTTG
CGCCTTGTCC CGCCTACGGA GCAAGAGCAG CCCTGGCAAT TGGAGTTTGG CTTACAAGCA
GCGACCGATC CCGATCGCTT TTGGCCGGCC TCTCTCCTCT GGCAGGATCC GCTGCCACCT
GGGCTACCAG ATCAATCTCA GGAATTGCTG TTACGCGGCT TGGGACAGGC TTGTCGGCTC
TATCCCCAAT TGCAAACCAG TCTGGCGACA GCCTGTCCAG AATTCCATCC ACTGACCACA
GCGGAGGTCT ATCAGCTGCT CAAGCAGGTG ATTCCTCAGT GGCAAGAGCA GGGCATTGAA
GTGCAACTGC CGCCGGGCTT GCGTGGTCAA GGGCGACACC GGCTGGGAGT GGAAGTCAGC
GCCACGTTGC CGAGCGATCG CCCGAGTGTG GGGCTGGAAG CACTACTGCA GTTTCGTTGG
GAGCTGAGTC TGGGCGGTCA GCGGCTGACC AAAGCAGAAG TGGAACGCTT GGCAGCCCTG
GAAACGCCCT TGGTGGAAAT CAACGGCGAC TGGATTGAGG TGCGGCCGCA GGATATTGAG
TCGGCGCGAG AGTTTTTCCG TAAGCGCAAG GATCAGCCAA ATTTGACCTT GGCGGATGCG
ATCGCGATCG CCAGTGGTGA GTCGCCGAAT GTTGGTCGCC TGCCGGTGGT CAATTTTGAA
GCGGCGGGCT TACTCGAAGA AGCCTTGGCC GTGTTTCAGG GGCAGCGATC GCCTGCGGCT
TTGCCCGCTC CGCCCACCTT TCAGGGCGAG CTGCGACCCT ATCAAGAGCG GGGGGTGGGC
TGGCTCAGCT TTTTGCAGCG CTTCGGGATT GGGGCTTGCC TCGCCGACGA CATGGGCTTG
GGTAAGACGA TTCAGCTGCT GGCCTTTTTA CTGCATCTCA AACACAGCAA CGAGCTGACG
CGGCCGGTGC TGCTAGTCTG TCCGACTTCG GTGCTGGGCA ACTGGGAACG GGAGGTGCAG
AAATTTGCAC CGGAGCTTCG CTGGAAGCTG CACTATGGCC CCGATCGCGC TCAGGGTAAG
GCTTTGGCGA CAGCGCTCAA GGACTGCGAT TTGGTGCTGA CCAGTTACTC CTTGGTGGCG
CGAGATCAGA AAGCGATCGC GGCGATCGAC TGGCAAGGCA TTGTGCTGGA TGAAGCCCAG
AACATCAAGA ATGACCAGGC GAAACAGACG CAGGCGGTGC GAGCGATCGC CCAAAGTCCG
ACGCAAAAGC CCCGCTTTCG GATTGCCCTG ACAGGGACGC CGGTTGAGAA TCGCCTCAGT
GAGTTGTGGT CGATTGTCGA GTTTTTGCAG CCGGGACATT TAGGCACCAA GCCATTCTTT
CAAAAGCGCT TTGTCACGCC GATCGAGCGT TTTGGCGATG CGGATTCGCT GACAGCATTG
CGGCAGCGCG TGCAACCGTT AATCCTACGG CGACTGAAAA CCGATCGCAG CATTATTGCC
GACTTGCCTG AGAAGCAAGA AATGACGGTC TTTTGTCCGT TGGTACAGGA GCAGGCCGAT
CGCTATCAGG TGCTAGTCAA TGAAGCGCTA GCCAATATTG AAGCAAGTGA AGGCATTCAG
CGGCGCGGCC AGATTTTGGC ATTGCTAACG CGACTGAAGC AGCTCTGTAA TCATCCGTCG
TTGTTGCTCG AAAAGCCGAA GCTCGATCCG AATTTTGGCG ATCGCTCAGC CAAGTTGCAG
CGCTTACTAG AAATGTTGGC GGAGCTAACG GATGCGGGCG ATCGCGCTTT GGTGTTTACG
CAGTTTGCGG GCTGGGGTAG TTTGCTGCAG CAATTTTTGC AGGAACAGCT AGGGCGAGAG
GTGCTGTTTT TGTCGGGCAG TACCAAGAAG GGCGATCGCC AACAGATGGT TGATCGCTTC
CAAAATGATC CGCAGGCACC GGCAATTTTC ATCCTGTCAT TGAAGGCTGG CGGGGTGGGG
CTCAACCTGA CGAAAGCCAA TCATGTCTTT CATTACGATC GCTGGTGGAA TCCGGCAGTT
GAAAACCAAG CGACCGATCG CGCGTTTCGG ATTGGGCAAC GACGCAATGT ACAGGTGCAC
AAGTTTGTCT GCGCTGGCAC TCTAGAAGAA AAAATTGATC AGATGATCGC TAGCAAGCAA
GCATTAGCAC AGCAGATTGT CGGTAGTGGT GAGGATTGGC TAACGGAACT AGACACCAAT
CAACTCCGGC AACTCTTGAT CCTCGATCGC TCAGCTTGGG TAGAAGAGGA AGAGCCTTAG
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| Protein sequence | MAVLHGGWLG DRFCVWAEAW QAGEPQSAAE IAIHPYAIAA TDLNDWCQKY RLGSLTGTPT
EVLLSIPSDL KKEAVLPFLS GQEIPDGALL WSWQIPVLSL EAAIAGQWLA TLPLGSAEDH
PWLGPDLRFW SHIYRWAQSL LARGRFYPAL ESSDRGLTAV WLPLFNQAGD RQRFDRYSQQ
LPFSQFCYQA IETAAACPWQ PQPQDLLLRV LQTWLTARLQ PAIAAGTLVS ADLLAAWQQS
LANGKPLKLE DSEASRLQTA IDRWLLPVQN GAAQAWRMVL RLVPPTEQEQ PWQLEFGLQA
ATDPDRFWPA SLLWQDPLPP GLPDQSQELL LRGLGQACRL YPQLQTSLAT ACPEFHPLTT
AEVYQLLKQV IPQWQEQGIE VQLPPGLRGQ GRHRLGVEVS ATLPSDRPSV GLEALLQFRW
ELSLGGQRLT KAEVERLAAL ETPLVEINGD WIEVRPQDIE SAREFFRKRK DQPNLTLADA
IAIASGESPN VGRLPVVNFE AAGLLEEALA VFQGQRSPAA LPAPPTFQGE LRPYQERGVG
WLSFLQRFGI GACLADDMGL GKTIQLLAFL LHLKHSNELT RPVLLVCPTS VLGNWEREVQ
KFAPELRWKL HYGPDRAQGK ALATALKDCD LVLTSYSLVA RDQKAIAAID WQGIVLDEAQ
NIKNDQAKQT QAVRAIAQSP TQKPRFRIAL TGTPVENRLS ELWSIVEFLQ PGHLGTKPFF
QKRFVTPIER FGDADSLTAL RQRVQPLILR RLKTDRSIIA DLPEKQEMTV FCPLVQEQAD
RYQVLVNEAL ANIEASEGIQ RRGQILALLT RLKQLCNHPS LLLEKPKLDP NFGDRSAKLQ
RLLEMLAELT DAGDRALVFT QFAGWGSLLQ QFLQEQLGRE VLFLSGSTKK GDRQQMVDRF
QNDPQAPAIF ILSLKAGGVG LNLTKANHVF HYDRWWNPAV ENQATDRAFR IGQRRNVQVH
KFVCAGTLEE KIDQMIASKQ ALAQQIVGSG EDWLTELDTN QLRQLLILDR SAWVEEEEP
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