| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0861 |
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| Symbol | |
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| ID | 3774038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 864180 |
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| End bp | 865469 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637799277 |
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| Product | bifunctional sterol desaturase/short chain dehydrogenase |
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| Protein accession | YP_399878 |
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| Protein GI | 81299670 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0589823 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0593314 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCAG CTTGGACTGT TGCATTCGGC CTGTCCCTGC TTTCAATTCT TTGGGTGGAG
CTGGTTCGCG ATAGTTATCA CACCTTGGCC CACTATTGGA CGCCGCTCTA TCGGCTGCAT
GTCTGGCATC ACAAGGTTTT TCGCCCCGAT CTGACGGTTG TCGATCCAAC GATCTACAGT
CGCGCCCACT GGTATAACGA TGTCCCAGAA GCCAGTGTGA TGCTGCTCTG CGGCGGTTTA
TTCGGCTGGC TGGTACAGAC CTGGGTGACG GTTGGCGCTT GGCTGCCGTT TCTCGGTTGC
TTCTACACCT TGATCTTTCT GGGTGGGGCG ATCGCGCGGG GATTGGCCGT ACCGGGGGCT
GATGCCCTGA CGGACCTGAC GCACTTGCCC GGTCCTTTCA CTGCGCCCCC CAGCGCTTGG
TTAGTGAATC GCACCTACCA TTGGCGTCAT CACTTTGATA GCCAAACAGC CTATTTCTGT
GGCACGTTTT CATTTCTGGA CAAGCTGATG GGCACCGCAT TGTCGCTCAA GGGCAAAACA
GTGGCGGTAA CAGGGGCAGC TGGCGGATTG GGTCAGGCAC TGATTGTCGA ATTGCAGCGA
GCGGGAGCAA CGCCGGTTGC CTTGACTAGT GGTAGCCGTG CCCTGCCAGC ACTCTTTGAA
GATCTGGGGG TGCGAGTCTT GCACTGGCAA GTGGGGCAAG AGGCGGCGAT CGCCGAAGAT
TTACGGCGCA TTGATATCCT GCTGCTCAAC CACGGCGTCA ATGTTCTGGG CGATCGCTCA
GCGACAGCGA TTGAGCAGTC CTACGAAGTC AATGCTTTTT CGCAGTGGCG TTTGCTAGAG
CTGTTCCTAG AGACAGTCAC GGATAATCGC GCAATCGCTC GGAAGGAAGT CTGGGTGAAT
ACTTCAGAAG CTGAGGTCAA TCCGGCCTTT AGTCCGCTCT ACGAACTCAG TAAGCGGGCA
ATTGGACATT TGGTGACGCT GCGCCGCCTC GACTCTCCTA TTGTCTTGCG CAAACTCATC
CTTGGGCCGT TTCGCAGCGA TCTCAATCCC TATGGCGTGA TGTCCGCTCG CTGGGTAGCT
CGCCAAGTGG TAGCTCTGGC CAAGCGCGAT ATTCGTAACA TTATCGTGAC AATCAACCCC
TTAACCTATC TGCTCTTCCC AATCAAAGAA GTCAGTGCTT CTTGGTACTA CCGCTTATTT
AGTCGGTCGG GGCGATCGCT AACGTTTACA GACTCTTCAG CAAAAGTTCA TGAAGTGATT
AACCAGCCTA GAGAGAAATT TCTACGATAA
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| Protein sequence | MAAAWTVAFG LSLLSILWVE LVRDSYHTLA HYWTPLYRLH VWHHKVFRPD LTVVDPTIYS
RAHWYNDVPE ASVMLLCGGL FGWLVQTWVT VGAWLPFLGC FYTLIFLGGA IARGLAVPGA
DALTDLTHLP GPFTAPPSAW LVNRTYHWRH HFDSQTAYFC GTFSFLDKLM GTALSLKGKT
VAVTGAAGGL GQALIVELQR AGATPVALTS GSRALPALFE DLGVRVLHWQ VGQEAAIAED
LRRIDILLLN HGVNVLGDRS ATAIEQSYEV NAFSQWRLLE LFLETVTDNR AIARKEVWVN
TSEAEVNPAF SPLYELSKRA IGHLVTLRRL DSPIVLRKLI LGPFRSDLNP YGVMSARWVA
RQVVALAKRD IRNIIVTINP LTYLLFPIKE VSASWYYRLF SRSGRSLTFT DSSAKVHEVI
NQPREKFLR
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