Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0857 |
Symbol | |
ID | 3774034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 855315 |
End bp | 855821 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637799273 |
Product | CheW protein |
Protein accession | YP_399874 |
Protein GI | 81299666 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0835] Chemotaxis signal transduction protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.201526 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0222726 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAGTT CTCTCTCCTT TGAATTAACA AATACTGGAG CTGCTGATCA AACCACTCAG TCTTTTTTAA AGCTCAGGTT GAGTGATACT ACGATCGCGG TGATTCCGAC GGTTGAGGCT CAAGAAGTCG TGATGGTCAC TCATCAACAG TTAACCTTGA TGCCCAACAT GCCCGGCACT ATCTTGGGTT TACTCAATCA CCGCAACCGC GTGATTTGGG TCATCGATCT ACCGCAGTTG CTGGGGTTAC CCATGCTGAT GCTGGATTTA CGGCAATACG CTGTTGTCGT CATCCAAGTA GCGGGCCAAT TACTGGGGTT AGCCATTCAA CAAATTGAAG GGCTGAGCCG GCTTAATCCC AGCGATATCC AATCTCCTGT CGGCTCCGTG GATGCCTCCT TGGTGCCTTT CTTGCGAGGC TGCTACCTCC AAGATCAAGA GTTGTTGTTG GTCTTAGATG CTGCTGCGAT CGCCCATGCC AAGAGCCTGC AGCCCCACGC TATTTAA
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Protein sequence | MNSSLSFELT NTGAADQTTQ SFLKLRLSDT TIAVIPTVEA QEVVMVTHQQ LTLMPNMPGT ILGLLNHRNR VIWVIDLPQL LGLPMLMLDL RQYAVVVIQV AGQLLGLAIQ QIEGLSRLNP SDIQSPVGSV DASLVPFLRG CYLQDQELLL VLDAAAIAHA KSLQPHAI
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