Gene Synpcc7942_0831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0831 
Symbol 
ID3774009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp825403 
End bp826005 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content56% 
IMG OID637799248 
Producthypothetical protein 
Protein accessionYP_399850 
Protein GI81299642 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.826973 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCCGA CTTTTCAACC TTCAGCCCGC ATTGGAGCAG CCGTTAGCCT TGCAGCGCAG 
CTTCATGCCG ATCAAGTACG CAAAGGCACC AGCATTCCCT ATCTAGCGCA TCTACTCGCC
GTCGCCAGCT TGGTGATGGA GCATGGCGGC GATGAAGATC AGACGATTGC CGCTCTTTTG
CACGATGCCA TCGAAGATAC TGGCCCCGAA TCAGAAGCTT TGATTCGTGA GCAGTTTGGC
GATCGCGTAA CTGCCATTGT TTGGGGTTGC ACCGACGGCG TACCTGATGC AGCAGGTCAA
AAGCCAGACT GGCGCGATCG CAAACAGCAA TACCTGCAGC ATTTAGCCAC CGTTGCTCCA
GATATCCTGC TCGTCTCGGC CTGCGACAAG CTCCACAATG CGCGATCGAT TTTGATCGAC
TTGCAGAACC ATGGGCTAGT ACTGTTCGAC CGATTCAAGG CTGGACAAGC TGGCACAATC
TGGTATTACC AGCAGCTCGC TACTTGCTTC CAAGCGCGGC TGCCGGGGCC GCTCAGCCAG
CAACTCAGCC AGACCGTTGA AGCCATCCAG CAAACGGCGA AGCAGCTTGA AAGTCTGGTT
TGA
 
Protein sequence
MLPTFQPSAR IGAAVSLAAQ LHADQVRKGT SIPYLAHLLA VASLVMEHGG DEDQTIAALL 
HDAIEDTGPE SEALIREQFG DRVTAIVWGC TDGVPDAAGQ KPDWRDRKQQ YLQHLATVAP
DILLVSACDK LHNARSILID LQNHGLVLFD RFKAGQAGTI WYYQQLATCF QARLPGPLSQ
QLSQTVEAIQ QTAKQLESLV