Gene Synpcc7942_0828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0828 
Symbol 
ID3776006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp822873 
End bp823241 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content56% 
IMG OID637799245 
Producthypothetical protein 
Protein accessionYP_399847 
Protein GI81299639 
COG category[S] Function unknown 
COG ID[COG3651] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCAAG GTCAAAATGT CCTCGGTCAG GACCTCGAAG TTTGCTGCTG TGCCCCGATG 
ACCGGCTGGT ATCGCAATGG TTTTTGCCAA ACCGATGTCC AAGATCGCGG TAGCCATACG
GTCTGCGCTG AGATGACAGA AGAGTTTTTG CTGTTCTCGC GCGATCGCGG CAATGACTTG
ATGACGCCTC GCCCTGAGTT CAATTTCCCC GGACTGAAAG CCGGCGATCG CTGGTGCCTC
TGCGCCAGTC GCTGGCAAGA AGCTTTTGAA GCAGGCATGG CACCGCCGGT GGTTTTGCAA
TCAACTGAAA AAAGCGCCCT GCGCTACGTC AGCTTGGCGG ATTTACAAGC TCATGCCCTG
CCGGTTTAG
 
Protein sequence
MGQGQNVLGQ DLEVCCCAPM TGWYRNGFCQ TDVQDRGSHT VCAEMTEEFL LFSRDRGNDL 
MTPRPEFNFP GLKAGDRWCL CASRWQEAFE AGMAPPVVLQ STEKSALRYV SLADLQAHAL
PV