Gene Synpcc7942_0775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0775 
Symbol 
ID3775952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp767242 
End bp767721 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content59% 
IMG OID637799191 
Producthypothetical protein 
Protein accessionYP_399794 
Protein GI81299586 
COG category[S] Function unknown 
COG ID[COG1963] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.905473 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.132253 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATCCG TCCTCCGTCA ATTGCTGGCC AATGACGTCC TCGTTGCTGC CCTGCTTGCC 
TGCGGCCTCG CTCAGTTCTC AAAACTGATT GTTGAGGGGG TGCGCGATCG CCGTCTGAAC
TGGCATGTGC TGATTGAAAC CGGCGGTATG CCCAGCTCGC ACTCGGCGTT GGTCGCTGCA
TTGGCCACGG CTGTTGGCCG ACAGCAGGGT TGGGGCAGCC TTGAATTTGC GGTTGTCACC
GTCTTCGCGA TCATCGTCAT GTACGACGCA GCAGGGGTGC GCTGGGCGGC AGGTCGCCAA
GCTCGTATTT TGAACCTGAT CAGCGAGCAG GTGCTGACCA CCTCAGAGGA AGAAGATGCG
ATCGAGCGTC TGAAGGAAGC CCTGGGACAT ACCCGACTGG AAGTTCTGGT CGGCGCGATC
ATGGGCGTTG CGATCGCCCT GCTACTAGAG CCTGCTCTGT TACTCTCCGA GTGGCTGTAA
 
Protein sequence
MLSVLRQLLA NDVLVAALLA CGLAQFSKLI VEGVRDRRLN WHVLIETGGM PSSHSALVAA 
LATAVGRQQG WGSLEFAVVT VFAIIVMYDA AGVRWAAGRQ ARILNLISEQ VLTTSEEEDA
IERLKEALGH TRLEVLVGAI MGVAIALLLE PALLLSEWL