Gene Synpcc7942_0741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0741 
Symbol 
ID3775913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp734713 
End bp735552 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content61% 
IMG OID637799155 
ProductPhage tail protein I 
Protein accessionYP_399760 
Protein GI81299552 
COG category 
COG ID 
TIGRFAM ID[TIGR01634] phage tail protein, P2 protein I family 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.463872 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCT ACGATCTTCT GCCACCGAAC GCAACGCCGC TTGAGCGCAA CCTGTCGCGA 
GCAACGTCGA CGCTCGACCG CATCGCCCGA CCGGTGCCGA TCATCCGCAT CGCGAAGCGG
GTCAACATTC CTGACGGCGT AATCCCATGG CTGGTTTATG AGTATGGGCT GGGCGAGCTG
CTGCCCTACA TCACGAATCA GCGGCGGCTT GTCTCTGAGG GTGTGCTGTG GCAGCGGATC
AGGGGCACAC CTGCGAGTAT CCGCATCGGC CTGACGTGGG TCGATGTGGA GGGTTTTGTC
GAGGAGTCGG AGCGAGGAAC GCGGCGCTGG GCTGAGTTCA TGATCGGTCT TGACGCTGCC
GTCGACGCGG ACACAATCGA CCGGATCGTC GGCATTGCCC GCATCGCATC GCCCGTGCGA
TCGCGGCTGC AGCGCATCTT CGCTGTCTAC GACTTCCGGC GCTTCGTATT GGACGAGAGC
GGTCTGTCTG ACGGCGGGAT CTTGTCCGAC CACTCGGGTA CGCGACCCCG CCCCGACTGG
CCCCAGATCA GCTTCGGTGA CTTTCGCGGC AAAACAATTG ACGCTGCCCC CGAGCCGATC
GCCAGCGTGC TGATCGACTA CTCCCCCGCA CAAGTGACTA AGCTCGATCG CTTCTTGCTC
AGCGAGGGGC GGCTTGACGA AGAGTGGCAC GTCTTGAACT ACCCGCTGCT GATGAGTGAG
GAGAATGTTG AGTCGGTAAC GTATAGCGGC CAAACTTGGG GACCGTTCGG TTGGGTCAGT
GAAACTTGGG GGAGTGTTGA GACCGTCGTC TCAACACAAG TCAGTACACT AACCAGTTAG
 
Protein sequence
MSRYDLLPPN ATPLERNLSR ATSTLDRIAR PVPIIRIAKR VNIPDGVIPW LVYEYGLGEL 
LPYITNQRRL VSEGVLWQRI RGTPASIRIG LTWVDVEGFV EESERGTRRW AEFMIGLDAA
VDADTIDRIV GIARIASPVR SRLQRIFAVY DFRRFVLDES GLSDGGILSD HSGTRPRPDW
PQISFGDFRG KTIDAAPEPI ASVLIDYSPA QVTKLDRFLL SEGRLDEEWH VLNYPLLMSE
ENVESVTYSG QTWGPFGWVS ETWGSVETVV STQVSTLTS