Gene Synpcc7942_0660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0660 
Symbol 
ID3775643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp655282 
End bp656253 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content61% 
IMG OID637799072 
Productarogenate dehydrogenase 
Protein accessionYP_399679 
Protein GI81299471 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0287] Prephenate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.3682 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGGC CAGGCATCTT CTGCAGTTTG CTCTCGCAGC CAGCGGCGCA GCAATTGGTG 
AACTTCGACC TCAAACATTG GCTCATCCTA GCGGCCTCGG GGTCGGTAGG ATCAACAACA
GTGGCAAGAG ATGTTATGCG CATCGGCATT GTTGGACTGG GCCTGATTGG CGGCTCTCTG
GGGTTTGATT GGCGCGATCG CGGTCACAGG CTCTTGGGCT ACAGTCGTCG TCCTGCGACC
TGTGAGCGGG CGATCGCGCG GGGCGTTGTC GACCATGCCA GTCCAGATCC AGCTGTGCTG
ACAGAGGCTG AAGTGATCGT CTTGGCGACC CCCTTGGGGG TGCTGGAAAC GACCGTGCGG
GAATTGCGGG ATTACTGGCA TCCGGAGGCG ATCGTCACCG ATGTCGGCTC GGTTAAACAG
CCGATCGTGG CTGCCTTGGA CCCCCTCTGG CCGCGCTTTG TGGGGGGGCA CCCGATGGCG
GGCACTGCTG AAAATGGGAT TGAAGCCGCA CTGCGGGGCC TGTTCCAGAA TCGGCCCTAC
GTGCTGACGC CCACTGACCA GACGGATCCA GCGGCGATCG CGGTGGTTGC ACAGTTGGCA
CAGGAACTGG GATCGGTGGT GCTGCACTGC GACCCCGCCA GCCACGATCG CGCGGTGGCC
ACGATTTCCC ATTTGCCGGT CTTTATCAGC GCCAGCCTGA TTCAGACCTG TCTGCAGGAA
CCGGATCCGG CGGTGCAAAC CTTGGCAGCC ACTCTCGCTA GCTCTGGCTT CTGCGATACG
AGTCGGGTGG GTGGCGGCAA TCCAGAGCTG GGGGTAATGA TGGCTCGCTA TAACCAAGCA
GCACTGCTCG AGCAGATCGA TCGCTATCAG ATCCAGCTGG AACGCCTAAA GACTGCGATC
GCCGCCGCCG ATGAACCGGC GATCGCCGCA ATCCTGCAGC AAAATCAGGA GATGCGGCCA
CGCTATCTTT AG
 
Protein sequence
MMRPGIFCSL LSQPAAQQLV NFDLKHWLIL AASGSVGSTT VARDVMRIGI VGLGLIGGSL 
GFDWRDRGHR LLGYSRRPAT CERAIARGVV DHASPDPAVL TEAEVIVLAT PLGVLETTVR
ELRDYWHPEA IVTDVGSVKQ PIVAALDPLW PRFVGGHPMA GTAENGIEAA LRGLFQNRPY
VLTPTDQTDP AAIAVVAQLA QELGSVVLHC DPASHDRAVA TISHLPVFIS ASLIQTCLQE
PDPAVQTLAA TLASSGFCDT SRVGGGNPEL GVMMARYNQA ALLEQIDRYQ IQLERLKTAI
AAADEPAIAA ILQQNQEMRP RYL